fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm018898 not found in 168aa AT2G18060.1 1st_1st 0.368998628 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18060.1     ----MEPMESCSVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQE
Sm018898_Selmo1 MSSSIQLSGTSSVPPGFRFHPTDEELVGYYLAKKVAASKIDLDVIREIDLYKLEPWDLQE
                    ::   :.******************** **:*:.********:****::*******

AT2G18060.1     QCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDK-TKLIGMRKTL
Sm018898_Selmo1 RCRIGSAEQHEWYFFSHKDKKYPTGTRTNRATGAGFWKATGRDKPIFARVSKLIGMRKTL
                :****  **:********************** ***********.:: : :*********

AT2G18060.1     VFYKGRAPNGKKSDWIMHEYRLESD-ENAPPQEEGWVVCRAFKKRATGQAKNTETWSSSY
Sm018898_Selmo1 VFYKGRAPNGQKSDWIMHEYRLEDDINNTATNEEGWVVCRVFRKR---------------
                **********:************.* :*:..:********.*:**               

AT2G18060.1     FYDEVAPNGVNSVMDPIDYISKQQHNIFGKGLMCKQELEGMVDGINYIQSNQFIQLPQLQ
Sm018898_Selmo1 ----------NVV-----------------------------------------------
                          * *                                               

AT2G18060.1     SPSLPLMKRPSSSMSITSMDNNYNYKLPLADEESFESFIRGEDRRKKKKQVMMTGNWREL
Sm018898_Selmo1 ------------------------------------------------------------
                                                                            

AT2G18060.1     DKFVASQLMSQEDNGTSSFAGHHIVNEDKNNNDVEMDSSMFLSEREEENRFVSEFLSTNS
Sm018898_Selmo1 ------------------------------------------------------------
                                                                            

AT2G18060.1     DYDIGICVFDN
Sm018898_Selmo1 -----------
BoxShade v3.31 C (beta, 970507) Output
AT2G18060.1     - - - - M E P M E S C S V P P G F R F H P T D E E L V G Y Y L R K K I A S Q K I D L D V I R D I D L Y R I E P W D L Q E
Sm018898_Selmo1    M S S S I Q L S G T S S V P P G F R F H P T D E E L V G Y Y L A K K V A A S K I D L D V I R E I D L Y K L E P W D L Q E
 
AT2G18060.1     Q C R I G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y D K - T K L I G M R K T L
Sm018898_Selmo1    R C R I G S A E Q H E W Y F F S H K D K K Y P T G T R T N R A T G A G F W K A T G R D K P I F A R V S K L I G M R K T L
 
AT2G18060.1     V F Y K G R A P N G K K S D W I M H E Y R L E S D - E N A P P Q E E G W V V C R A F K K R A T G Q A K N T E T W S S S Y
Sm018898_Selmo1    V F Y K G R A P N G Q K S D W I M H E Y R L E D D I N N T A T N E E G W V V C R V F R K R - - - - - - - - - - - - - - -
 
AT2G18060.1     F Y D E V A P N G V N S V M D P I D Y I S K Q Q H N I F G K G L M C K Q E L E G M V D G I N Y I Q S N Q F I Q L P Q L Q
Sm018898_Selmo1    - - - - - - - - - - N V V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G18060.1     S P S L P L M K R P S S S M S I T S M D N N Y N Y K L P L A D E E S F E S F I R G E D R R K K K K Q V M M T G N W R E L
Sm018898_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G18060.1     D K F V A S Q L M S Q E D N G T S S F A G H H I V N E D K N N N D V E M D S S M F L S E R E E E N R F V S E F L S T N S
Sm018898_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G18060.1     D Y D I G I C V F D N
Sm018898_Selmo1    - - - - - - - - - - -
 
0