fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000696 not found in 342aa AT2G18060.1 not_1st 0.609053497 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18060.1     -MEPMESCSVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCR
pt000696_POPTR_ MMESMESC-VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIRDIDLYRIEPWDLQERCW
                 **.**** **********************:*************************:* 

AT2G18060.1     IGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYK
pt000696_POPTR_ IGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYK
                ************************************************************

AT2G18060.1     GRAPNGKKSDWIMHEYRLESDENAPPQEEGWVVCRAFKKRATGQAKNTETWSSSYFYDEV
pt000696_POPTR_ GRAPNGQKTHWIMHEYRLESDENGPPQEEGWVVCRAFKKRTTGQTKSIEGWDSSYFYEE-
                ******:*:.*************.****************:***:*. * *.*****:* 

AT2G18060.1     APNGVNSVMDPIDYISKQQHNIFGKGLMCKQELEGMVDGINYIQSNQFIQLPQLQSPSLP
pt000696_POPTR_ -SSGVSSVVDPIDYIARQPQGFLAHNFLCKQEIEG--DNLSFMHSENFVQLPQLKSPSEP
                 ..**.**:******::* :.::.:.::****:**  *.:.:::*::*:*****:*** *

AT2G18060.1     LMKRPSSSMSITSMDNNYNYKLPLADEESFESFIRGEDRRKKKKQVMMTGNWRELDKFVA
pt000696_POPTR_ LIKRPTSSMSLISENNNSN------NEEVEQNGLSNNNTQK-------VTDWRALDKFVA
                *:***:****: * :** *      :**  :. : .:: :*       . :** ******

AT2G18060.1     SQLMSQED----NGTSSFAGHHIVNEDKNNNDVEMDSSMFLSEREEENRFVSEFLSTNSD
pt000696_POPTR_ SQL-SQEERYDGDGVSSFV------EAENNSDLPF--LLLQSGRDDGNKF-NGFLGSSSD
                *** ***:    :*.***.      * :**.*: :   :: * *:: *:* . **.:.**

AT2G18060.1     YDIGICVFDN
pt000696_POPTR_ CDIGICIFEK
                 *****:*::
BoxShade v3.31 C (beta, 970507) Output
AT2G18060.1     - M E P M E S C S V P P G F R F H P T D E E L V G Y Y L R K K I A S Q K I D L D V I R D I D L Y R I E P W D L Q E Q C R
pt000696_POPTR_    M M E S M E S C - V P P G F R F H P T D E E L V G Y Y L R K K V A S Q K I D L D V I R D I D L Y R I E P W D L Q E R C W
 
AT2G18060.1     I G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y D K T K L I G M R K T L V F Y K
pt000696_POPTR_    I G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y D K T K L I G M R K T L V F Y K
 
AT2G18060.1     G R A P N G K K S D W I M H E Y R L E S D E N A P P Q E E G W V V C R A F K K R A T G Q A K N T E T W S S S Y F Y D E V
pt000696_POPTR_    G R A P N G Q K T H W I M H E Y R L E S D E N G P P Q E E G W V V C R A F K K R T T G Q T K S I E G W D S S Y F Y E E -
 
AT2G18060.1     A P N G V N S V M D P I D Y I S K Q Q H N I F G K G L M C K Q E L E G M V D G I N Y I Q S N Q F I Q L P Q L Q S P S L P
pt000696_POPTR_    - S S G V S S V V D P I D Y I A R Q P Q G F L A H N F L C K Q E I E G - - D N L S F M H S E N F V Q L P Q L K S P S E P
 
AT2G18060.1     L M K R P S S S M S I T S M D N N Y N Y K L P L A D E E S F E S F I R G E D R R K K K K Q V M M T G N W R E L D K F V A
pt000696_POPTR_    L I K R P T S S M S L I S E N N N S N - - - - - - N E E V E Q N G L S N N N T Q K - - - - - - - V T D W R A L D K F V A
 
AT2G18060.1     S Q L M S Q E D - - - - N G T S S F A G H H I V N E D K N N N D V E M D S S M F L S E R E E E N R F V S E F L S T N S D
pt000696_POPTR_    S Q L - S Q E E R Y D G D G V S S F V - - - - - - E A E N N S D L P F - - L L L Q S G R D D G N K F - N G F L G S S S D
 
AT2G18060.1     Y D I G I C V F D N
pt000696_POPTR_    C D I G I C I F E K
 
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