fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021254 not found in 436aa AT4G36160.1 not_not 0.410150891 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18060.1     --------------------------------MEPMESC----SVPPGFRFHPTDEELVG
Sb021254_Sorbi1 RSATYMYICICIDIVCCHASVWFSRSGRGCHILPPPRSCVQTRRVGHG-------AQQAG
                                                : * .**     *  *        : .*

AT2G18060.1     YYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEWYFFSHKDKKYPTGTRT
Sb021254_Sorbi1 FPVPDAVEEQK-----RRHVRGVLIVPGSMRPQRRLAAA------IFRVQARALPGGALL
                : : . : .**      *.:    * * .:: * *:.        :*  : :  * *:  

AT2G18060.1     NRATMAGFWKATGRDKAVYDKTKLIGMRK-TLVFYKGR--APNGKKSDWIMHEYRL----
Sb021254_Sorbi1 VRAEL-------GRDEPV-ERPPVRGRRGVSLAVNQGHQVAPLVRR-----HQRRALELW
                 ** :       ***:.* ::. : * *  :*.. :*:  **  ::     *: *     

AT2G18060.1     ESDENAPPQEEGWV-----VCRA-FKKRATGQAKNTETWSSSYFYDEVAPNGVNSVMDP-
Sb021254_Sorbi1 ELGEAAGVLQEGGTGGGGRRCTIRLRRRLLLEARR-RAGDDGIVVVRVAPVPCSSDAAPW
                * .* *   :** .      *   :::*   :*:. .: ... .  .***   .*   * 

AT2G18060.1     ---IDYISKQQHN--IFGKGLMCKQELEGMVDGINYIQSNQFIQLPQLQSPSLPLMKRPS
Sb021254_Sorbi1 WVHCSLLERSAHHPAFF---LRC-----GVLVGLQPILVHDPVGLAAVGRP--PRVE---
                    . :.:. *:  :*   * *     *:: *:: *  :: : *. :  *  * ::   

AT2G18060.1     SSMSITSMDNNYNYKLPLADEESFESFIRGEDRR----------KKKKQVMMTGNWRELD
Sb021254_Sorbi1 ------------DERLAHADEPA--AAVLGVAHRLVPAGGLPEPRQRRPV------RARP
                            : :*. *** :  : : *  :*          :::: *      *   

AT2G18060.1     KFVASQLMSQEDNGTSSFAGHHIV-------NEDKNN--NDVEMD--SSMFLSEREEENR
Sb021254_Sorbi1 RRVLAVLVAEEVPVTLLLVTNLAVLLEIPWLNAVEVNVADDVEVDLLRGHLLPEVVADEL
                : * : *:::*   *  :. :  *       *  : *  :***:*   . :*.*   :: 

AT2G18060.1     FVSEFL-STNSDYDIGICVFDN
Sb021254_Sorbi1 LVRGVKPKTRRDA---------
                :*  .  .*. *
BoxShade v3.31 C (beta, 970507) Output
AT2G18060.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E P M E S C - - - - S V P P G F R F H P T D E E L V G
Sb021254_Sorbi1    R S A T Y M Y I C I C I D I V C C H A S V W F S R S G R G C H I L P P P R S C V Q T R R V G H G - - - - - - - A Q Q A G
 
AT2G18060.1     Y Y L R K K I A S Q K I D L D V I R D I D L Y R I E P W D L Q E Q C R I G Y E E Q N E W Y F F S H K D K K Y P T G T R T
Sb021254_Sorbi1    F P V P D A V E E Q K - - - - - R R H V R G V L I V P G S M R P Q R R L A A A - - - - - - I F R V Q A R A L P G G A L L
 
AT2G18060.1     N R A T M A G F W K A T G R D K A V Y D K T K L I G M R K - T L V F Y K G R - - A P N G K K S D W I M H E Y R L - - - -
Sb021254_Sorbi1    V R A E L - - - - - - - G R D E P V - E R P P V R G R R G V S L A V N Q G H Q V A P L V R R - - - - - H Q R R A L E L W
 
AT2G18060.1     E S D E N A P P Q E E G W V - - - - - V C R A - F K K R A T G Q A K N T E T W S S S Y F Y D E V A P N G V N S V M D P -
Sb021254_Sorbi1    E L G E A A G V L Q E G G T G G G G R R C T I R L R R R L L L E A R R - R A G D D G I V V V R V A P V P C S S D A A P W
 
AT2G18060.1     - - - I D Y I S K Q Q H N - - I F G K G L M C K Q E L E G M V D G I N Y I Q S N Q F I Q L P Q L Q S P S L P L M K R P S
Sb021254_Sorbi1    W V H C S L L E R S A H H P A F F - - - L R C - - - - - G V L V G L Q P I L V H D P V G L A A V G R P - - P R V E - - -
 
AT2G18060.1     S S M S I T S M D N N Y N Y K L P L A D E E S F E S F I R G E D R R - - - - - - - - - - K K K K Q V M M T G N W R E L D
Sb021254_Sorbi1    - - - - - - - - - - - - D E R L A H A D E P A - - A A V L G V A H R L V P A G G L P E P R Q R R P V - - - - - - R A R P
 
AT2G18060.1     K F V A S Q L M S Q E D N G T S S F A G H H I V - - - - - - - N E D K N N - - N D V E M D - - S S M F L S E R E E E N R
Sb021254_Sorbi1    R R V L A V L V A E E V P V T L L L V T N L A V L L E I P W L N A V E V N V A D D V E V D L L R G H L L P E V V A D E L
 
AT2G18060.1     F V S E F L - S T N S D Y D I G I C V F D N
Sb021254_Sorbi1    L V R G V K P K T R R D A - - - - - - - - -
 
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