fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022399 not found in 389aa AT2G18060.1 1st_1st 0.488340192 Ia
Sb021254 not found in 436aa AT4G36160.1 not_not 0.410150891 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18060.1     --------------------------------MEPMESCSVPPGFRFHPTDEELVGYYLR
Sb021254_Sorbi1 RSATYMYICICIDIVCCHASVWFSRSGRGCHILPPPRSC-VQTRRVGHGAQQ--AGFPVP
Sb022399_Sorbi1 --------------------------------MDSMESC-VPPGFRFHPTDEELVGYYLR
                                                : . .** * .    * :::  .*: : 

AT2G18060.1     KKIASQKIDLDVIRDIDLYRIEPWDLQEQCRIGYEEQNEWYFFSHKDKKYPTGTRTNRAT
Sb021254_Sorbi1 DAVEEQK-----RRHVRGVLIVPGSMRPQRRLAAA------IFRVQARALPGGALLVRAE
Sb022399_Sorbi1 KKVASQKIDLDVIRDIDLYRIEPWDLQEHCGIGYEEQNEWYFFSYKDRKYPTGTRTNRAT
                . : .**      *.:    * * .:: :  :.        :*  : :  * *:   ** 

AT2G18060.1     MAGFWKATGRDKAV------------------YDKTKLI--GMRKTL----------VFY
Sb021254_Sorbi1 L-------GRDEPVERPPVRGRRGVSLAVNQGHQVAPLVRRHQRRALELWELGEAAGVLQ
Sb022399_Sorbi1 MAGFWKATGRDKAV------------------HDKSRLI--GMRKTL----------VFY
                :       ***:.*                  :: : *:    *::*          *: 

AT2G18060.1     KGRAPNGKKSDWIMHEYRLESDENAPPQEEGWVVCRAFKKRATGQAKNTE-TW-------
Sb021254_Sorbi1 EGGTGGGGRRCTIRLRRRLLLEARRRAGDDGIVVVRV----APVPCSSDAAPWWVHCSLL
Sb022399_Sorbi1 KGRAPNGQKTDWIMHEYRLETDENAPPQEEGWVVCRAFKKRTAYPARSMAMAW-------
                :* : .* :   *  . **  : .  . ::* ** *.    :.  . .   .*       

AT2G18060.1     -----SSSYFYDEVAPNGVNSVMDPIDYIS--------KQQHNIFGKGLMCKQ--ELEGM
Sb021254_Sorbi1 ERSAHHPAFFLR----CGVLVGLQPILVHDPVGLAA--------VGRPPRVEDE------
Sb022399_Sorbi1 -----DPSYAYREVSAMGAAVAAEAAAFVDPNAAYAQIRRQSN---KSARFKQEAELDGA
                      .::        *.    :.    .                :    ::       

AT2G18060.1     VDGINYIQSNQFIQLPQLQSPSLPLMK-----RPSSSMSITSMDNNYNYKLPLADEESFE
Sb021254_Sorbi1 -------------RLAHADEPAAAVLGVAHRLVPAGG-------------LPEPRQ----
Sb022399_Sorbi1 AAALLQYSSSHLVELPQLESPSAPLA-------PANQSQASAAD---------------E
                             .*.: :.*: .:        *:.                        

AT2G18060.1     SFIRGED--RR--KKKKQVMMTGNWRELDKFVASQLMSQEDNG----------TSSFAGH
Sb021254_Sorbi1 ---------RRP-VRARPR------RVLAVLVAEEV---------------PVTLLLVTN
Sb022399_Sorbi1 VVVDGADSGRRPGKKARADKMATDWRALDKFVASQLSPAAECGGSLEAAAAAASTAAAGN
                         **   : :        * *  :**.::                 :   . :

AT2G18060.1     HIVNED---------KNNNDVEMD-----------SSMFLSE--REEENRFVSEFLSTNS
Sb021254_Sorbi1 LAVLLEIPWLNAVEVNVADDVEVDLLRGHLLPEVVADELLVRGVKPKTRRDA--------
Sb022399_Sorbi1 VGSQLD---------HVEDDDDMA-----------ALLFLNSDGREEAERWTGLLGPAGG
                     :         :  :* ::            :  :*    : : .* .        

AT2G18060.1     DYDIGICVFDN
Sb021254_Sorbi1 -----------
Sb022399_Sorbi1 DGDFGLCVFEK
BoxShade v3.31 C (beta, 970507) Output
AT2G18060.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E P M E S C S V P P G F R F H P T D E E L V G Y Y L R
Sb021254_Sorbi1    R S A T Y M Y I C I C I D I V C C H A S V W F S R S G R G C H I L P P P R S C - V Q T R R V G H G A Q Q - - A G F P V P
Sb022399_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D S M E S C - V P P G F R F H P T D E E L V G Y Y L R
 
AT2G18060.1     K K I A S Q K I D L D V I R D I D L Y R I E P W D L Q E Q C R I G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T
Sb021254_Sorbi1    D A V E E Q K - - - - - R R H V R G V L I V P G S M R P Q R R L A A A - - - - - - I F R V Q A R A L P G G A L L V R A E
Sb022399_Sorbi1    K K V A S Q K I D L D V I R D I D L Y R I E P W D L Q E H C G I G Y E E Q N E W Y F F S Y K D R K Y P T G T R T N R A T
 
AT2G18060.1     M A G F W K A T G R D K A V - - - - - - - - - - - - - - - - - - Y D K T K L I - - G M R K T L - - - - - - - - - - V F Y
Sb021254_Sorbi1    L - - - - - - - G R D E P V E R P P V R G R R G V S L A V N Q G H Q V A P L V R R H Q R R A L E L W E L G E A A G V L Q
Sb022399_Sorbi1    M A G F W K A T G R D K A V - - - - - - - - - - - - - - - - - - H D K S R L I - - G M R K T L - - - - - - - - - - V F Y
 
AT2G18060.1     K G R A P N G K K S D W I M H E Y R L E S D E N A P P Q E E G W V V C R A F K K R A T G Q A K N T E - T W - - - - - - -
Sb021254_Sorbi1    E G G T G G G G R R C T I R L R R R L L L E A R R R A G D D G I V V V R V - - - - A P V P C S S D A A P W W V H C S L L
Sb022399_Sorbi1    K G R A P N G Q K T D W I M H E Y R L E T D E N A P P Q E E G W V V C R A F K K R T A Y P A R S M A M A W - - - - - - -
 
AT2G18060.1     - - - - - S S S Y F Y D E V A P N G V N S V M D P I D Y I S - - - - - - - - K Q Q H N I F G K G L M C K Q - - E L E G M
Sb021254_Sorbi1    E R S A H H P A F F L R - - - - C G V L V G L Q P I L V H D P V G L A A - - - - - - - - V G R P P R V E D E - - - - - -
Sb022399_Sorbi1    - - - - - D P S Y A Y R E V S A M G A A V A A E A A A F V D P N A A Y A Q I R R Q S N - - - K S A R F K Q E A E L D G A
 
AT2G18060.1     V D G I N Y I Q S N Q F I Q L P Q L Q S P S L P L M K - - - - - R P S S S M S I T S M D N N Y N Y K L P L A D E E S F E
Sb021254_Sorbi1    - - - - - - - - - - - - - R L A H A D E P A A A V L G V A H R L V P A G G - - - - - - - - - - - - - L P E P R Q - - - -
Sb022399_Sorbi1    A A A L L Q Y S S S H L V E L P Q L E S P S A P L A - - - - - - - P A N Q S Q A S A A D - - - - - - - - - - - - - - - E
 
AT2G18060.1     S F I R G E D - - R R - - K K K K Q V M M T G N W R E L D K F V A S Q L M S Q E D N G - - - - - - - - - - T S S F A G H
Sb021254_Sorbi1    - - - - - - - - - R R P - V R A R P R - - - - - - R V L A V L V A E E V - - - - - - - - - - - - - - - P V T L L L V T N
Sb022399_Sorbi1    V V V D G A D S G R R P G K K A R A D K M A T D W R A L D K F V A S Q L S P A A E C G G S L E A A A A A A S T A A A G N
 
AT2G18060.1     H I V N E D - - - - - - - - - K N N N D V E M D - - - - - - - - - - - S S M F L S E - - R E E E N R F V S E F L S T N S
Sb021254_Sorbi1    L A V L L E I P W L N A V E V N V A D D V E V D L L R G H L L P E V V A D E L L V R G V K P K T R R D A - - - - - - - -
Sb022399_Sorbi1    V G S Q L D - - - - - - - - - H V E D D D D M A - - - - - - - - - - - A L L F L N S D G R E E A E R W T G L L G P A G G
 
AT2G18060.1     D Y D I G I C V F D N
Sb021254_Sorbi1    - - - - - - - - - - -
Sb022399_Sorbi1    D G D F G L C V F E K
 
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