fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030146 not found in 344aa AT2G18060.1 not_1st 0.572016460 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18060.1     MEPMESCSVPPGFRFHPTDEELVGYYLRKKIASQKIDLDVIRDIDLYRIEPWDLQEQCRI
gm030146_Glyma1 MESMESC-VPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRI
                **.**** **********************:***********:*************:***

AT2G18060.1     GYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKTKLIGMRKTLVFYKG
gm030146_Glyma1 GYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKG
                *******************************************:::**************

AT2G18060.1     RAPNGKKSDWIMHEYRLESDENAPPQEEGWVVCRAFKKRATGQAK--NTETWSSSYFYDE
gm030146_Glyma1 RAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWESSYFYDE
                *****:****************.***************::***:*  * * *.*******

AT2G18060.1     VAPNGVNSVMDPIDYISKQQHNIFGKGLMCKQELEGMVDGINYIQSNQFIQLPQLQSPSL
gm030146_Glyma1 -ASGATSTLVDPIELISRQSQSFLAQNFMCKQELEA--DNLTCMHQDPFVQLPQLESPSL
                 *.....:::***: **:*.:.::.:.:*******.  *.:. ::.: *:*****:****

AT2G18060.1     PLMKRPSSSMSITSMDNNYNYKLPLADEESFESFIRGEDRRKK-------KKQVMMTGNW
gm030146_Glyma1 PLVKKP-STVSLVSDNNN-----------------EGEDNQNRLLFNNNNTKKV--TTDW
                **:*:* *::*:.* :**                 .***.:::       .*:*  * :*

AT2G18060.1     RELDKFVASQLMSQEDNG--------TSSFAGHHIVNEDKNNNDVEMDSSMFLSEREEEN
gm030146_Glyma1 RALDKFVASQL-SQEVNTHETNVGVLSSSFEPH------DDNHDMAL--LLLQSSRDEGN
                * ********* *** *         :***  *      .:*:*: :   :: *.*:* *

AT2G18060.1     RFVSEFLSTNSDYDIGICVFDN
gm030146_Glyma1 R-LSPFLNTSSDCDNGIC----
                * :* **.*.** * ***
BoxShade v3.31 C (beta, 970507) Output
AT2G18060.1     M E P M E S C S V P P G F R F H P T D E E L V G Y Y L R K K I A S Q K I D L D V I R D I D L Y R I E P W D L Q E Q C R I
gm030146_Glyma1    M E S M E S C - V P P G F R F H P T D E E L V G Y Y L R K K V A S Q K I D L D V I R E I D L Y R I E P W D L Q E R C R I
 
AT2G18060.1     G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y D K T K L I G M R K T L V F Y K G
gm030146_Glyma1    G Y E E Q N E W Y F F S H K D K K Y P T G T R T N R A T M A G F W K A T G R D K A V Y E R A K L I G M R K T L V F Y K G
 
AT2G18060.1     R A P N G K K S D W I M H E Y R L E S D E N A P P Q E E G W V V C R A F K K R A T G Q A K - - N T E T W S S S Y F Y D E
gm030146_Glyma1    R A P N G Q K S D W I M H E Y R L E S D E N G P P Q E E G W V V C R A F K K K T T G Q T K T I N I E G W E S S Y F Y D E
 
AT2G18060.1     V A P N G V N S V M D P I D Y I S K Q Q H N I F G K G L M C K Q E L E G M V D G I N Y I Q S N Q F I Q L P Q L Q S P S L
gm030146_Glyma1    - A S G A T S T L V D P I E L I S R Q S Q S F L A Q N F M C K Q E L E A - - D N L T C M H Q D P F V Q L P Q L E S P S L
 
AT2G18060.1     P L M K R P S S S M S I T S M D N N Y N Y K L P L A D E E S F E S F I R G E D R R K K - - - - - - - K K Q V M M T G N W
gm030146_Glyma1    P L V K K P - S T V S L V S D N N N - - - - - - - - - - - - - - - - - E G E D N Q N R L L F N N N N T K K V - - T T D W
 
AT2G18060.1     R E L D K F V A S Q L M S Q E D N G - - - - - - - - T S S F A G H H I V N E D K N N N D V E M D S S M F L S E R E E E N
gm030146_Glyma1    R A L D K F V A S Q L - S Q E V N T H E T N V G V L S S S F E P H - - - - - - D D N H D M A L - - L L L Q S S R D E G N
 
AT2G18060.1     R F V S E F L S T N S D Y D I G I C V F D N
gm030146_Glyma1    R - L S P F L N T S S D C D N G I C - - - -
 
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