fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032682 not found in 160aa AT4G34590.1 1st_not 0.428571428 II
Pt037919 not found in 156aa AT1G75390.1 1st_not 0.431972789 II
Pt001429 not found in 168aa AT2G18160.1 not_1st 0.428571428 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSDSVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTAQ
gm032682_Glyma1 MASSSGTSSGSS-LLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQ
pt037919_POPTR_ MASSSGNSSGST-QLQNSGSEEQV-VLVDQRKRKRMLSNRESARRSRMRKQKYLGDLMAQ
pt001429_POPTR_ MASSSGASSGSTAMLRNSSSEEDPQQIMDLRKRKRMLSNRESARRSRMRKQKHLDDLTGQ
                *****.   .*:    .... .:    :* ******:***************::.** .*

AT2G18160.1     INQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQ-SNGAG
gm032682_Glyma1 VAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTVAG
pt037919_POPTR_ VAQLRTDNNQILTTINVTTQHFLNVEAENSILRAQMMELNHRLDSLNEILNYIN------
pt001429_POPTR_ LRQLARENNEILTRMNVISQLYMNIEAENSILRAQMAELTHRLDSLNEIIEYAN------
                : **  :*.:**. :.: :* ::.::****:* **: **. **:*****::  :      

AT2G18160.1     FGVDQIDGCGFD--------------DRTVGIDGYYDDMNMMSNVNHWGGSVYTNQPI--
gm032682_Glyma1 FGAAATSSTFVE----------------PINNNSFFNPLNMG----------YLNHPI--
pt037919_POPTR_ -----TSNGIFEIDHHEDL--------QTSADHGFMNPLNLI----------YLNQPI--
pt001429_POPTR_ -----FSDGLFE---PEDAVASVSATSHQIGDGFFMNPWNNAN--------SHVNQPIMD
                      ..  .:                      : :  *            : *:**  

AT2G18160.1     MA-NDINMY-
gm032682_Glyma1 MASADILQY-
pt037919_POPTR_ MASPDLFQY-
pt001429_POPTR_ MVIDNLLMVC
                *.  ::
BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D S V V T V D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L T A Q
gm032682_Glyma1    M A S S S G T S S G S S - L L Q N S G S E E D L Q A V M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V S Q
pt037919_POPTR_    M A S S S G N S S G S T - Q L Q N S G S E E Q V - V L V D Q R K R K R M L S N R E S A R R S R M R K Q K Y L G D L M A Q
pt001429_POPTR_    M A S S S G A S S G S T A M L R N S S S E E D P Q Q I M D L R K R K R M L S N R E S A R R S R M R K Q K H L D D L T G Q
 
AT2G18160.1     I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q - S N G A G
gm032682_Glyma1    V A Q L R K E N Q Q I L T S V N I T T Q Q Y L S V E A E N S V L R A Q V G E L S H R L E S L N E I V D V L N A T T V A G
pt037919_POPTR_    V A Q L R T D N N Q I L T T I N V T T Q H F L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N - - - - - -
pt001429_POPTR_    L R Q L A R E N N E I L T R M N V I S Q L Y M N I E A E N S I L R A Q M A E L T H R L D S L N E I I E Y A N - - - - - -
 
AT2G18160.1     F G V D Q I D G C G F D - - - - - - - - - - - - - - D R T V G I D G Y Y D D M N M M S N V N H W G G S V Y T N Q P I - -
gm032682_Glyma1    F G A A A T S S T F V E - - - - - - - - - - - - - - - - P I N N N S F F N P L N M G - - - - - - - - - - Y L N H P I - -
pt037919_POPTR_    - - - - - T S N G I F E I D H H E D L - - - - - - - - Q T S A D H G F M N P L N L I - - - - - - - - - - Y L N Q P I - -
pt001429_POPTR_    - - - - - F S D G L F E - - - P E D A V A S V S A T S H Q I G D G F F M N P W N N A N - - - - - - - - S H V N Q P I M D
 
AT2G18160.1     M A - N D I N M Y -
gm032682_Glyma1    M A S A D I L Q Y -
pt037919_POPTR_    M A S P D L F Q Y -
pt001429_POPTR_    M V I D N L L M V C
 
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