fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030618 not found in 166aa AT4G34590.1 not_not 0.425170068 III
Pt019941 not found in 155aa AT1G75390.1 not_not 0.428571428 III
Pt000643 not found in 155aa AT1G75390.1 not_not 0.411564625 III
Pt020822 not found in 155aa AT4G34590.1 not_not 0.408163265 III
Pt036857 not found in 164aa AT4G34590.1 not_not 0.404761904 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSDSVVTV-DERKRKRMLSNRESARRSRMRKQKHVDDLTA
gm030618_Glyma1 MACSSGTSSGSLSLLQNSGSEEDLQAMMEDQRKRKRMISNRESARRSRMRKQKHLDDLVS
pt019941_POPTR_ MASSSGTSSGS-SLIQNSGSEEDLQALM-DQRKRKRMISNRESARRSRMRKQKHLDDLMA
pt020822_POPTR_ MASSSGTSSGS-SLIQNSGSEENLQALM-DQRKRKRMISNRESARRSRMRKQKHLDDLVA
pt000643_POPTR_ MASSSGDSSGF-TQLQNSGSEENTQMMLVDQRKRKRMQSNRESARRSRMKKQKHLDDLMA
pt036857_POPTR_ MASSSGASSGSTTMLRNSSSEEDLQQVM-DLRKRKRMLSNRESARRSRVKKQKHLDDLMG
                **.**.   .  :   .... .:    : * ****** **********::****:*** .

AT2G18160.1     QINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGAG
gm030618_Glyma1 QVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTTV
pt019941_POPTR_ QVSQLRKENHQIITGINITTQRYLSVEADNSILRVQISELSNRLESLNEIIGSLNSNNGV
pt020822_POPTR_ QVAQLKKENHQIITSINITTQHYLNVEADNSILRAQVSELSHRLEFLNGIISLLNSSNGL
pt000643_POPTR_ QVTQLRKDNNQILTTINVTTQHYLNVEAENSILRAQMMELNHRLDSLNEILNYINTSNGI
pt036857_POPTR_ QLGQLSKENNEILKRMNVTSQLYMNIEAENSILRAQMAELSHRLNSLNEIIEYVHFCSGT
                *: ** ::*.:*:. :.:*:* *:.::*:**:* .*: **. **: ** *:  ::     

AT2G18160.1     FGVDQIDGCGFDDRTVG------IDGYYDDMNMMSNVNHWGGSVYTNQPIMAN-DINMY
gm030618_Glyma1 AGFGAAASSTFVEPMNN------NNNSFFNFNPLNMG-------YLNQPIMASADILQY
pt019941_POPTR_ FG----DSITFNEPA---------ADSF--LNPWNMA-------YLNQPIMASAEMFHY
pt020822_POPTR_ FG----DSSIFNEPA---------ADSF--LNPFNMS-------YLNQPISASADMFQY
pt000643_POPTR_ FE----NDHHEDLP----------DHSF--MNPSNLF-------YLNQPIMASPDLFQY
pt036857_POPTR_ FE----RREDAAAPTTGAFGHQLVDDFF--MNPWNNAD-----FHLNKPIM---DMIMY
                                           :  :*  .         : *:**    ::  *
BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D S V V T V - D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L T A
gm030618_Glyma1    M A C S S G T S S G S L S L L Q N S G S E E D L Q A M M E D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V S
pt019941_POPTR_    M A S S S G T S S G S - S L I Q N S G S E E D L Q A L M - D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L M A
pt020822_POPTR_    M A S S S G T S S G S - S L I Q N S G S E E N L Q A L M - D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V A
pt000643_POPTR_    M A S S S G D S S G F - T Q L Q N S G S E E N T Q M M L V D Q R K R K R M Q S N R E S A R R S R M K K Q K H L D D L M A
pt036857_POPTR_    M A S S S G A S S G S T T M L R N S S S E E D L Q Q V M - D L R K R K R M L S N R E S A R R S R V K K Q K H L D D L M G
 
AT2G18160.1     Q I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q S N G A G
gm030618_Glyma1    Q V A Q L R K E N Q Q I L T S V N I T T Q Q Y L S V E A E N S V L R A Q V G E L S H R L E S L N E I V D V L N A T T T V
pt019941_POPTR_    Q V S Q L R K E N H Q I I T G I N I T T Q R Y L S V E A D N S I L R V Q I S E L S N R L E S L N E I I G S L N S N N G V
pt020822_POPTR_    Q V A Q L K K E N H Q I I T S I N I T T Q H Y L N V E A D N S I L R A Q V S E L S H R L E F L N G I I S L L N S S N G L
pt000643_POPTR_    Q V T Q L R K D N N Q I L T T I N V T T Q H Y L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N G I
pt036857_POPTR_    Q L G Q L S K E N N E I L K R M N V T S Q L Y M N I E A E N S I L R A Q M A E L S H R L N S L N E I I E Y V H F C S G T
 
AT2G18160.1     F G V D Q I D G C G F D D R T V G - - - - - - I D G Y Y D D M N M M S N V N H W G G S V Y T N Q P I M A N - D I N M Y
gm030618_Glyma1    A G F G A A A S S T F V E P M N N - - - - - - N N N S F F N F N P L N M G - - - - - - - Y L N Q P I M A S A D I L Q Y
pt019941_POPTR_    F G - - - - D S I T F N E P A - - - - - - - - - A D S F - - L N P W N M A - - - - - - - Y L N Q P I M A S A E M F H Y
pt020822_POPTR_    F G - - - - D S S I F N E P A - - - - - - - - - A D S F - - L N P F N M S - - - - - - - Y L N Q P I S A S A D M F Q Y
pt000643_POPTR_    F E - - - - N D H H E D L P - - - - - - - - - - D H S F - - M N P S N L F - - - - - - - Y L N Q P I M A S P D L F Q Y
pt036857_POPTR_    F E - - - - R R E D A A A P T T G A F G H Q L V D D F F - - M N P W N N A D - - - - - F H L N K P I M - - - D M I M Y
 
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