fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037919 not found in 156aa AT1G75390.1 1st_not 0.431972789 II
Pt001429 not found in 168aa AT2G18160.1 not_1st 0.428571428 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSDS--VVTVDERKRKRMLSNRESARRSRMRKQKHVDDLT
pt001429_POPTR_ MASSSGA--SSGSTAMLRNSSSEEDPQQIMDLRKRKRMLSNRESARRSRMRKQKHLDDLT
pt037919_POPTR_ MASSSGN--SSGST-QLQNSGSEEQ-VVLVDQRKRKRMLSNRESARRSRMRKQKYLGDLM
                *****.   **.*:   .*. *:.     :* **********************::.** 

AT2G18160.1     AQINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNGA
pt001429_POPTR_ GQLRQLARENNEILTRMNVISQLYMNIEAENSILRAQMAELTHRLDSLNEIIEYANFSDG
pt037919_POPTR_ AQVAQLRTDNNQILTTINVTTQHFLNVEAENSILRAQMMELNHRLDSLNEILNYINTSNG
                .*: **  :*.:**. :.* :* :::::****:* *** **. **:*****::  : ...

AT2G18160.1     GFGVDQIDGCGFDDRTVG--------IDGYYDDMNMMSNVNHWGGSVYTNQPI--MA-ND
pt001429_POPTR_ LFE--------PEDAVASVSATSHQIGDGFF--MNPWNNAN-----SHVNQPIMDMVIDN
pt037919_POPTR_ IFEID-----HHEDLQTS--------ADHGF--MNPLNLI-------YLNQPI--MASPD
                 *          :*  ..         *  :  **  .         : ****  *.  :

AT2G18160.1     INMY-
pt001429_POPTR_ LLMVC
pt037919_POPTR_ LFQY-
                :
BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D S - - V V T V D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L T
pt001429_POPTR_    M A S S S G A - - S S G S T A M L R N S S S E E D P Q Q I M D L R K R K R M L S N R E S A R R S R M R K Q K H L D D L T
pt037919_POPTR_    M A S S S G N - - S S G S T - Q L Q N S G S E E Q - V V L V D Q R K R K R M L S N R E S A R R S R M R K Q K Y L G D L M
 
AT2G18160.1     A Q I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q S N G A
pt001429_POPTR_    G Q L R Q L A R E N N E I L T R M N V I S Q L Y M N I E A E N S I L R A Q M A E L T H R L D S L N E I I E Y A N F S D G
pt037919_POPTR_    A Q V A Q L R T D N N Q I L T T I N V T T Q H F L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N G
 
AT2G18160.1     G F G V D Q I D G C G F D D R T V G - - - - - - - - I D G Y Y D D M N M M S N V N H W G G S V Y T N Q P I - - M A - N D
pt001429_POPTR_    L F E - - - - - - - - P E D A V A S V S A T S H Q I G D G F F - - M N P W N N A N - - - - - S H V N Q P I M D M V I D N
pt037919_POPTR_    I F E I D - - - - - H H E D L Q T S - - - - - - - - A D H G F - - M N P L N L I - - - - - - - Y L N Q P I - - M A S P D
 
AT2G18160.1     I N M Y -
pt001429_POPTR_    L L M V C
pt037919_POPTR_    L F Q Y -
 
0