fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019941 not found in 155aa AT1G75390.1 not_not 0.428571428 III
Pt000643 not found in 155aa AT1G75390.1 not_not 0.411564625 III
Pt020822 not found in 155aa AT4G34590.1 not_not 0.408163265 III
Pt036857 not found in 164aa AT4G34590.1 not_not 0.404761904 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSDSVVT---VDERKRKRMLSNRESARRSRMRKQKHVDDL
pt036857_POPTR_ MASSSGA--SSGSTTMLRNSSSEEDLQ-QVMDLRKRKRMLSNRESARRSRVKKQKHLDDL
pt000643_POPTR_ MASSSGD--SSGF-TQLQNSGSEENTQMMLVDQRKRKRMQSNRESARRSRMKKQKHLDDL
pt019941_POPTR_ MASSSGT--SSGS-SLIQNSGSEEDLQ-ALMDQRKRKRMISNRESARRSRMRKQKHLDDL
pt020822_POPTR_ MASSSGT--SSGS-SLIQNSGSEENLQ-ALMDQRKRKRMISNRESARRSRMRKQKHLDDL
                *****.   **.     .*. *:.      :* ****** **********::****:***

AT2G18160.1     TAQINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNG
pt036857_POPTR_ MGQLGQLSKENNEILKRMNVTSQLYMNIEAENSILRAQMAELSHRLNSLNEIIEYVHFCS
pt000643_POPTR_ MAQVTQLRKDNNQILTTINVTTQHYLNVEAENSILRAQMMELNHRLDSLNEILNYINTSN
pt019941_POPTR_ MAQVSQLRKENHQIITGINITTQRYLSVEADNSILRVQISELSNRLESLNEIIGSLNSNN
pt020822_POPTR_ VAQVAQLKKENHQIITSINITTQHYLNVEADNSILRAQVSELSHRLEFLNGIISLLNSSN
                 .*: ** ::*.:*:. :.:*:* *:.::*:**:* .*: **. **: ** *:  ::  .

AT2G18160.1     AGFGVDQIDGCGFDDRTVGIDGYYDDMNMMSNVNHWGGS-VYTNQPIMAN-DINMY
pt036857_POPTR_ GTFERRE------DAAAPTTGAFGHQLVDDFFMNPWNNADFHLNKPIM---DMIMY
pt000643_POPTR_ GIFEND----------------HHEDLPDHSFMNPSNL--FYLNQPIMASPDLFQY
pt019941_POPTR_ GVFGDSI--------------TFNEPAAD-SFLNPWNM--AYLNQPIMASAEMFHY
pt020822_POPTR_ GLFGDSS--------------IFNEPAAD-SFLNPFNM--SYLNQPISASADMFQY
                . *                   . .       :*  .    : *:**    ::  *
BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D S V V T - - - V D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L
pt036857_POPTR_    M A S S S G A - - S S G S T T M L R N S S S E E D L Q - Q V M D L R K R K R M L S N R E S A R R S R V K K Q K H L D D L
pt000643_POPTR_    M A S S S G D - - S S G F - T Q L Q N S G S E E N T Q M M L V D Q R K R K R M Q S N R E S A R R S R M K K Q K H L D D L
pt019941_POPTR_    M A S S S G T - - S S G S - S L I Q N S G S E E D L Q - A L M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L
pt020822_POPTR_    M A S S S G T - - S S G S - S L I Q N S G S E E N L Q - A L M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L
 
AT2G18160.1     T A Q I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q S N G
pt036857_POPTR_    M G Q L G Q L S K E N N E I L K R M N V T S Q L Y M N I E A E N S I L R A Q M A E L S H R L N S L N E I I E Y V H F C S
pt000643_POPTR_    M A Q V T Q L R K D N N Q I L T T I N V T T Q H Y L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N
pt019941_POPTR_    M A Q V S Q L R K E N H Q I I T G I N I T T Q R Y L S V E A D N S I L R V Q I S E L S N R L E S L N E I I G S L N S N N
pt020822_POPTR_    V A Q V A Q L K K E N H Q I I T S I N I T T Q H Y L N V E A D N S I L R A Q V S E L S H R L E F L N G I I S L L N S S N
 
AT2G18160.1     A G F G V D Q I D G C G F D D R T V G I D G Y Y D D M N M M S N V N H W G G S - V Y T N Q P I M A N - D I N M Y
pt036857_POPTR_    G T F E R R E - - - - - - D A A A P T T G A F G H Q L V D D F F M N P W N N A D F H L N K P I M - - - D M I M Y
pt000643_POPTR_    G I F E N D - - - - - - - - - - - - - - - - H H E D L P D H S F M N P S N L - - F Y L N Q P I M A S P D L F Q Y
pt019941_POPTR_    G V F G D S I - - - - - - - - - - - - - - T F N E P A A D - S F L N P W N M - - A Y L N Q P I M A S A E M F H Y
pt020822_POPTR_    G L F G D S S - - - - - - - - - - - - - - I F N E P A A D - S F L N P F N M - - S Y L N Q P I S A S A D M F Q Y
 
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