fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037919 not found in 156aa AT1G75390.1 1st_not 0.431972789 II
Pt019941 not found in 155aa AT1G75390.1 not_not 0.428571428 III
Pt001429 not found in 168aa AT2G18160.1 not_1st 0.428571428 II
Pt000643 not found in 155aa AT1G75390.1 not_not 0.411564625 III
Pt020822 not found in 155aa AT4G34590.1 not_not 0.408163265 III
Pt036857 not found in 164aa AT4G34590.1 not_not 0.404761904 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSDSV---VTVDERKRKRMLSNRESARRSRMRKQKHVDDL
pt000643_POPTR_ MASSSGD--SSGFT-QLQNSGSEENTQMMLVDQRKRKRMQSNRESARRSRMKKQKHLDDL
pt037919_POPTR_ MASSSGN--SSGST-QLQNSGSEE--QVVLVDQRKRKRMLSNRESARRSRMRKQKYLGDL
pt001429_POPTR_ MASSSGA--SSGSTAMLRNSSSEEDPQ-QIMDLRKRKRMLSNRESARRSRMRKQKHLDDL
pt019941_POPTR_ MASSSGT--SSGSS-LIQNSGSEEDLQ-ALMDQRKRKRMISNRESARRSRMRKQKHLDDL
pt020822_POPTR_ MASSSGT--SSGSS-LIQNSGSEENLQ-ALMDQRKRKRMISNRESARRSRMRKQKHLDDL
pt036857_POPTR_ MASSSGA--SSGSTTMLRNSSSEEDLQ-QVMDLRKRKRMLSNRESARRSRVKKQKHLDDL
                *****.   **. :   .*. *:.      :* ****** **********::***::.**

AT2G18160.1     TAQINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNG
pt000643_POPTR_ MAQVTQLRKDNNQILTTINVTTQHYLNVEAENSILRAQMMELNHRLDSLNEILNYINTSN
pt037919_POPTR_ MAQVAQLRTDNNQILTTINVTTQHFLNVEAENSILRAQMMELNHRLDSLNEILNYINTSN
pt001429_POPTR_ TGQLRQLARENNEILTRMNVISQLYMNIEAENSILRAQMAELTHRLDSLNEIIEYANFSD
pt019941_POPTR_ MAQVSQLRKENHQIITGINITTQRYLSVEADNSILRVQISELSNRLESLNEIIGSLNSNN
pt020822_POPTR_ VAQVAQLKKENHQIITSINITTQHYLNVEADNSILRAQVSELSHRLEFLNGIISLLNSSN
pt036857_POPTR_ MGQLGQLSKENNEILKRMNVTSQLYMNIEAENSILRAQMAELSHRLNSLNEIIEYVHFCS
                 .*: **  :*.:*:. :.: :* ::.::*:**:* .*: **. **: ** *:   :  .

AT2G18160.1     AGFGVDQIDGCGFDDRTVG----------IDGYYDDMNMMSNVNHWGGSVYTNQPIMAN-
pt000643_POPTR_ GIF------ENDHHEDL------------PDHSF--MNPSNLF-------YLNQPIMASP
pt037919_POPTR_ GIF------EIDHHEDLQT---------SADHGF--MNPLNLI-------YLNQPIMASP
pt001429_POPTR_ GLF--------E-PEDAVA-SVSATSHQIGDGFF--MNPWNNAN-----SHVNQPIM---
pt019941_POPTR_ GVFG----DSITFNEPA------------AD-SF--LNPWNMA-------YLNQPIMASA
pt020822_POPTR_ GLFG----DSSIFNEPA------------AD-SF--LNPFNMS-------YLNQPISASA
pt036857_POPTR_ GTF--------ERREDAAAPTTGAFGHQLVDDFF--MNPWNNAD-----FHLNKPIM---
                . *           :               *  :  :*  .         : *:**    

AT2G18160.1     DINMY------
pt000643_POPTR_ DLFQY------
pt037919_POPTR_ DLFQY------
pt001429_POPTR_ DMVIDNLLMVC
pt019941_POPTR_ EMFHY------
pt020822_POPTR_ DMFQY------
pt036857_POPTR_ DMIMY------
                ::
BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D S V - - - V T V D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L
pt000643_POPTR_    M A S S S G D - - S S G F T - Q L Q N S G S E E N T Q M M L V D Q R K R K R M Q S N R E S A R R S R M K K Q K H L D D L
pt037919_POPTR_    M A S S S G N - - S S G S T - Q L Q N S G S E E - - Q V V L V D Q R K R K R M L S N R E S A R R S R M R K Q K Y L G D L
pt001429_POPTR_    M A S S S G A - - S S G S T A M L R N S S S E E D P Q - Q I M D L R K R K R M L S N R E S A R R S R M R K Q K H L D D L
pt019941_POPTR_    M A S S S G T - - S S G S S - L I Q N S G S E E D L Q - A L M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L
pt020822_POPTR_    M A S S S G T - - S S G S S - L I Q N S G S E E N L Q - A L M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L
pt036857_POPTR_    M A S S S G A - - S S G S T T M L R N S S S E E D L Q - Q V M D L R K R K R M L S N R E S A R R S R V K K Q K H L D D L
 
AT2G18160.1     T A Q I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q S N G
pt000643_POPTR_    M A Q V T Q L R K D N N Q I L T T I N V T T Q H Y L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N
pt037919_POPTR_    M A Q V A Q L R T D N N Q I L T T I N V T T Q H F L N V E A E N S I L R A Q M M E L N H R L D S L N E I L N Y I N T S N
pt001429_POPTR_    T G Q L R Q L A R E N N E I L T R M N V I S Q L Y M N I E A E N S I L R A Q M A E L T H R L D S L N E I I E Y A N F S D
pt019941_POPTR_    M A Q V S Q L R K E N H Q I I T G I N I T T Q R Y L S V E A D N S I L R V Q I S E L S N R L E S L N E I I G S L N S N N
pt020822_POPTR_    V A Q V A Q L K K E N H Q I I T S I N I T T Q H Y L N V E A D N S I L R A Q V S E L S H R L E F L N G I I S L L N S S N
pt036857_POPTR_    M G Q L G Q L S K E N N E I L K R M N V T S Q L Y M N I E A E N S I L R A Q M A E L S H R L N S L N E I I E Y V H F C S
 
AT2G18160.1     A G F G V D Q I D G C G F D D R T V G - - - - - - - - - - I D G Y Y D D M N M M S N V N H W G G S V Y T N Q P I M A N -
pt000643_POPTR_    G I F - - - - - - E N D H H E D L - - - - - - - - - - - - P D H S F - - M N P S N L F - - - - - - - Y L N Q P I M A S P
pt037919_POPTR_    G I F - - - - - - E I D H H E D L Q T - - - - - - - - - S A D H G F - - M N P L N L I - - - - - - - Y L N Q P I M A S P
pt001429_POPTR_    G L F - - - - - - - - E - P E D A V A - S V S A T S H Q I G D G F F - - M N P W N N A N - - - - - S H V N Q P I M - - -
pt019941_POPTR_    G V F G - - - - D S I T F N E P A - - - - - - - - - - - - A D - S F - - L N P W N M A - - - - - - - Y L N Q P I M A S A
pt020822_POPTR_    G L F G - - - - D S S I F N E P A - - - - - - - - - - - - A D - S F - - L N P F N M S - - - - - - - Y L N Q P I S A S A
pt036857_POPTR_    G T F - - - - - - - - E R R E D A A A P T T G A F G H Q L V D D F F - - M N P W N N A D - - - - - F H L N K P I M - - -
 
AT2G18160.1     D I N M Y - - - - - -
pt000643_POPTR_    D L F Q Y - - - - - -
pt037919_POPTR_    D L F Q Y - - - - - -
pt001429_POPTR_    D M V I D N L L M V C
pt019941_POPTR_    E M F H Y - - - - - -
pt020822_POPTR_    D M F Q Y - - - - - -
pt036857_POPTR_    D M I M Y - - - - - -
 
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