fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032682 not found in 160aa AT4G34590.1 1st_not 0.428571428 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSDSVVTV-DERKRKRMLSNRESARRSRMRKQKHVDDLTA
gm032682_Glyma1 MASSSGT--SSGSSLLQNSGSEEDLQAVMDQRKRKRMISNRESARRSRMRKQKHLDDLVS
                *****.*  **.**   *....:.: :* *:******:****************:***.:

AT2G18160.1     QINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNG-A
gm032682_Glyma1 QVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTVA
                *: ** ::*:***.*:.:*:* *:.::****** **: *** **:*******::::.  *

AT2G18160.1     GFG--------VDQIDGCGFDDRTVGIDGYYDDMNMMSNVNHWGGSVYTNQPIMAN-DIN
gm032682_Glyma1 GFGAAATSSTFVEPINN----------NSFFNPLNMG----------YLNHPIMASADIL
                ***        *: *:.          :.::: :**           * *:****. ** 

AT2G18160.1     MY
gm032682_Glyma1 QY
                 *
BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D S V V T V - D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L T A
gm032682_Glyma1    M A S S S G T - - S S G S S L L Q N S G S E E D L Q A V M D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V S
 
AT2G18160.1     Q I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q S N G - A
gm032682_Glyma1    Q V A Q L R K E N Q Q I L T S V N I T T Q Q Y L S V E A E N S V L R A Q V G E L S H R L E S L N E I V D V L N A T T V A
 
AT2G18160.1     G F G - - - - - - - - V D Q I D G C G F D D R T V G I D G Y Y D D M N M M S N V N H W G G S V Y T N Q P I M A N - D I N
gm032682_Glyma1    G F G A A A T S S T F V E P I N N - - - - - - - - - - N S F F N P L N M G - - - - - - - - - - Y L N H P I M A S A D I L
 
AT2G18160.1     M Y
gm032682_Glyma1    Q Y
 
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