fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030618 not found in 166aa AT4G34590.1 not_not 0.425170068 III

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18160.1     MASSSSTYRSSSSSDGGNNNPSD-SVVTVDERKRKRMLSNRESARRSRMRKQKHVDDLTA
gm030618_Glyma1 MACSSGTSSGSLSLLQNSGSEEDLQAMMEDQRKRKRMISNRESARRSRMRKQKHLDDLVS
                **.**.*  .* *   .... .* ..:  *:******:****************:***.:

AT2G18160.1     QINQLSNDNRQILNSLTVTSQLYMKIQAENSVLTAQMEELSTRLQSLNEIVDLVQSNG--
gm030618_Glyma1 QVAQLRKENQQILTSVNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLNATTTV
                *: ** ::*:***.*:.:*:* *:.::****** **: *** **:*******::::.   

AT2G18160.1     AGFGVDQIDGCGFDDRTVGIDGYYDDMNMMSNVN--HWGGSVYTNQPIMAN-DINMY
gm030618_Glyma1 AGFGAAA--------SSTFVEPMNNNNNSFFNFNPLNMG---YLNQPIMASADILQY
                ****.           :. ::   :: * : *.*  : *   * ******. **  *


BoxShade v3.31 C (beta, 970507) Output
AT2G18160.1     M A S S S S T Y R S S S S S D G G N N N P S D - S V V T V D E R K R K R M L S N R E S A R R S R M R K Q K H V D D L T A
gm030618_Glyma1    M A C S S G T S S G S L S L L Q N S G S E E D L Q A M M E D Q R K R K R M I S N R E S A R R S R M R K Q K H L D D L V S
 
AT2G18160.1     Q I N Q L S N D N R Q I L N S L T V T S Q L Y M K I Q A E N S V L T A Q M E E L S T R L Q S L N E I V D L V Q S N G - -
gm030618_Glyma1    Q V A Q L R K E N Q Q I L T S V N I T T Q Q Y L S V E A E N S V L R A Q V G E L S H R L E S L N E I V D V L N A T T T V
 
AT2G18160.1     A G F G V D Q I D G C G F D D R T V G I D G Y Y D D M N M M S N V N - - H W G G S V Y T N Q P I M A N - D I N M Y
gm030618_Glyma1    A G F G A A A - - - - - - - - S S T F V E P M N N N N N S F F N F N P L N M G - - - Y L N Q P I M A S A D I L Q Y
 
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