fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027814 not found in 706aa AT2G18280.2 1st_not 0.567639257 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18280.1     --MSLKSILRDLKEVRDGLGGISKRSWSKSS-----------HIAPD------------Q
Sb027814_Sorbi1 AAMSLKSIVRELKEMRDGIGSMSRRGGSGSDGRAGHGRSGSRHSWPSLWAEQQQPQRQGQ
                  ******:*:***:***:*.:*:*. * *.           *  *.            *

AT2G18280.1     TTPPLDNIPQSPWASLPPELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVR
Sb027814_Sorbi1 EGPQHQHQHQGRWANLPPELLLDVIQRVESSEATWPARRQVVACAAVCRSWREVTKEVVK
                  *  ::  *. **.****** *:* ***.**::****  **:**:**:*** :* *:*:

AT2G18280.1     IPEQCGKLTFPISLKQPGPRDSPIQCFIKRNRATATYILYYGLMPS-ETENDKLLLAARR
Sb027814_Sorbi1 TLEECGRITFPISLKQPGPRDLPVQCFVRRERATSTYLLYLGLSPSMNMENDKLLLAARK
                  *:**::************* *:***::*:***:**:** ** ** : **********:

AT2G18280.1     IRRATCTDFIISLSAKNFSRSSSTYVGKLRSGFLGTKFTIYDNQ---TASSTAQAQPNRR
Sb027814_Sorbi1 VRRATRTSFVISLVSDDFSHSSSTYVGKLKPNFLGTKFTIFDSQPPPDAVVLPNNKPSKR
                :**** *.*:*** :.:**:*********:..********:*.*    *   .: :*.:*

AT2G18280.1     LHPKQAAPKLPTNSSTVGNITYELNVLRTRGPRRMHCAMDSIPLSSVIAE------PS-V
Sb027814_Sorbi1 -QSKQVSPRLPLGNYNVATVTYELTVLRNRGPRRMQCTMHSIP-AECIQEGGKAPTPTGT
                 :.**.:*:** .. .*..:****.***.******:*:*.*** :. * *      *: .

AT2G18280.1     VQGIEEEVSSSPSPKGETITTDKEIPDNSPSL--------RDQPLVLKNKSPRWHEQLQC
Sb027814_Sorbi1 IQSLDEPVSTSPSTKGKEVALEFSSTSLSADLSGLALACANETPLVLKNKAPRWHEQLQC
                :*.::* **:***.**: :: : . .. *..*        .: *******:*********

AT2G18280.1     WCLNFKGRVTVASVKNFQLVAEIDASLDAPPEEHERVILQFGKIGKDIFTMDYRYPLSAF
Sb027814_Sorbi1 WCLNFRGRVTVASVKNFQLVASVDPSLNIPAAEQEKVILQFGKIGKDIFTMDYRYPLSAF
                *****:***************.:*.**: *. *:*:************************

AT2G18280.1     QAFAICISSFDTKPACEG
Sb027814_Sorbi1 QAFAICLTSFDTKPACE-
                ******::*********
BoxShade v3.31 C (beta, 970507) Output
AT2G18280.1     - - M S L K S I L R D L K E V R D G L G G I S K R S W S K S S - - - - - - - - - - - H I A P D - - - - - - - - - - - - Q
Sb027814_Sorbi1    A A M S L K S I V R E L K E M R D G I G S M S R R G G S G S D G R A G H G R S G S R H S W P S L W A E Q Q Q P Q R Q G Q
 
AT2G18280.1     T T P P L D N I P Q S P W A S L P P E L L H D I I W R V E E S E T A W P A R A A V V S C A S V C K S W R G I T M E I V R
Sb027814_Sorbi1    E G P Q H Q H Q H Q G R W A N L P P E L L L D V I Q R V E S S E A T W P A R R Q V V A C A A V C R S W R E V T K E V V K
 
AT2G18280.1     I P E Q C G K L T F P I S L K Q P G P R D S P I Q C F I K R N R A T A T Y I L Y Y G L M P S - E T E N D K L L L A A R R
Sb027814_Sorbi1    T L E E C G R I T F P I S L K Q P G P R D L P V Q C F V R R E R A T S T Y L L Y L G L S P S M N M E N D K L L L A A R K
 
AT2G18280.1     I R R A T C T D F I I S L S A K N F S R S S S T Y V G K L R S G F L G T K F T I Y D N Q - - - T A S S T A Q A Q P N R R
Sb027814_Sorbi1    V R R A T R T S F V I S L V S D D F S H S S S T Y V G K L K P N F L G T K F T I F D S Q P P P D A V V L P N N K P S K R
 
AT2G18280.1     L H P K Q A A P K L P T N S S T V G N I T Y E L N V L R T R G P R R M H C A M D S I P L S S V I A E - - - - - - P S - V
Sb027814_Sorbi1    - Q S K Q V S P R L P L G N Y N V A T V T Y E L T V L R N R G P R R M Q C T M H S I P - A E C I Q E G G K A P T P T G T
 
AT2G18280.1     V Q G I E E E V S S S P S P K G E T I T T D K E I P D N S P S L - - - - - - - - R D Q P L V L K N K S P R W H E Q L Q C
Sb027814_Sorbi1    I Q S L D E P V S T S P S T K G K E V A L E F S S T S L S A D L S G L A L A C A N E T P L V L K N K A P R W H E Q L Q C
 
AT2G18280.1     W C L N F K G R V T V A S V K N F Q L V A E I D A S L D A P P E E H E R V I L Q F G K I G K D I F T M D Y R Y P L S A F
Sb027814_Sorbi1    W C L N F R G R V T V A S V K N F Q L V A S V D P S L N I P A A E Q E K V I L Q F G K I G K D I F T M D Y R Y P L S A F
 
AT2G18280.1     Q A F A I C I S S F D T K P A C E G
Sb027814_Sorbi1    Q A F A I C L T S F D T K P A C E -
 
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