fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030081 not found in 414aa AT2G18280.2 1st_not 0.644562334 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18280.1     MSLKSILRDLKEVRDGLG-----GISKRSWS--KSSHIAPDQTTPPLDNIPQSPWASLPP
gm030081_Glyma1 MSLKSIVRELKEMRDGIGSMSRRGVESRRWNGRTKSHVAPDVTLTSLEPIQQGHWANLPP
                ******:*:***:***:*     *:..* *.  ..**:*** * ..*: * *. **.***

AT2G18280.1     ELLHDIIWRVEESETAWPARAAVVSCASVCKSWRGITMEIVRIPEQCGKLTFPISLKQPG
gm030081_Glyma1 ELLLDIIRRVEDSETTWPARAVVVYCGSVCKSWRAVTKEIVKTPEQCGRLTFPISLKQPG
                *** *** ***:***:*****.** *.*******.:* ***: *****:***********

AT2G18280.1     PRDSPIQCFIKRNRATATYILYYGLMPSETENDKLLLAARRIRRATCTDFIISLSAKNFS
gm030081_Glyma1 PRDSPIQCFIRRNRETSTYLLYIGLVPSENETDKLLLAAKKVRRATGTDFIISLVADDFS
                **********:*** *:**:** **:***.*.*******:::**** ******* *.:**

AT2G18280.1     RSSSTYVGKLRSGFLGTKFTIYDNQTASSTA---QAQPNRRLHPKQAAPKLPTNSSTVGN
gm030081_Glyma1 RSSNTYVGKLRSNFLGTKFTIYDSQPPHGAAIQPDSQPSRRFHSKQVSPRVPACNYVVST
                ***.********.**********.*.. .:*   ::**.**:*.**.:*::*: . .*..

AT2G18280.1     ITYELNVLRTRGPRRMHCAMDSIPLSSVIA-----EPSVVQGIEEEVSSSPSPKGETITT
gm030081_Glyma1 IAYELNVLRARGPRRMHCTMNSIPVSAVQAGGNAPTPTFPEIIDEPFSPSPALKGKGPIR
                *:*******:********:*:***:*:* *      *:. : *:* .*.**: **:    

AT2G18280.1     DKEIPDNS--PSL-------RDQPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLV
gm030081_Glyma1 DL---DNASLPELLPVESQGSAEPLVLKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLV
                *    **:  *.*         :*******:*****************************

AT2G18280.1     AEIDASLDAPPEEHERVILQFGKIGKDIFTMDYRYPLSAFQAFAICISSFDTKPACEG
gm030081_Glyma1 SAVDPSHNVSAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE-
                : :*.* :... *:*:******************************:**********
BoxShade v3.31 C (beta, 970507) Output
AT2G18280.1     M S L K S I L R D L K E V R D G L G - - - - - G I S K R S W S - - K S S H I A P D Q T T P P L D N I P Q S P W A S L P P
gm030081_Glyma1    M S L K S I V R E L K E M R D G I G S M S R R G V E S R R W N G R T K S H V A P D V T L T S L E P I Q Q G H W A N L P P
 
AT2G18280.1     E L L H D I I W R V E E S E T A W P A R A A V V S C A S V C K S W R G I T M E I V R I P E Q C G K L T F P I S L K Q P G
gm030081_Glyma1    E L L L D I I R R V E D S E T T W P A R A V V V Y C G S V C K S W R A V T K E I V K T P E Q C G R L T F P I S L K Q P G
 
AT2G18280.1     P R D S P I Q C F I K R N R A T A T Y I L Y Y G L M P S E T E N D K L L L A A R R I R R A T C T D F I I S L S A K N F S
gm030081_Glyma1    P R D S P I Q C F I R R N R E T S T Y L L Y I G L V P S E N E T D K L L L A A K K V R R A T G T D F I I S L V A D D F S
 
AT2G18280.1     R S S S T Y V G K L R S G F L G T K F T I Y D N Q T A S S T A - - - Q A Q P N R R L H P K Q A A P K L P T N S S T V G N
gm030081_Glyma1    R S S N T Y V G K L R S N F L G T K F T I Y D S Q P P H G A A I Q P D S Q P S R R F H S K Q V S P R V P A C N Y V V S T
 
AT2G18280.1     I T Y E L N V L R T R G P R R M H C A M D S I P L S S V I A - - - - - E P S V V Q G I E E E V S S S P S P K G E T I T T
gm030081_Glyma1    I A Y E L N V L R A R G P R R M H C T M N S I P V S A V Q A G G N A P T P T F P E I I D E P F S P S P A L K G K G P I R
 
AT2G18280.1     D K E I P D N S - - P S L - - - - - - - R D Q P L V L K N K S P R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V
gm030081_Glyma1    D L - - - D N A S L P E L L P V E S Q G S A E P L V L K N K A P R W H E Q L Q C W C L N F K G R V T V A S V K N F Q L V
 
AT2G18280.1     A E I D A S L D A P P E E H E R V I L Q F G K I G K D I F T M D Y R Y P L S A F Q A F A I C I S S F D T K P A C E G
gm030081_Glyma1    S A V D P S H N V S A A E Q E K V I L Q F G K I G K D I F T M D Y R Y P L S A F Q A F A I C L S S F D T K P A C E -
 
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