fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18328.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022978 not found in 111aa AT1G75250.1 1st_not 0.6 II
Sb008392 not found in 98aa AT2G21650.1 1st_not 0.607407407 II
Gm030637 not found in 91aa AT1G19510.1 1st_not 0.711111111 II
Pt037449 not found in 78aa AT4G39250.1 1st_not 0.688888888 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18328.1     MASSSMST----------------SSWTAREDKQFEMALAKFDKDTPDRWQKIARAV-GG
pt037449_POPTR_ MSSNSL------------------TSWTPKQNKLFEKALALHDKDTPDRWHNVAKAV-GG
gm030637_Glyma1 MASSSLSKQKAS-----------DSSWTPKQNKLFEKALAKYDKDTPERWQNVAKAV-GG
Os022978_Os05t0 MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
Sb008392_Sorbi1 MATMSLSSTR--------------AQWTAKQNKLFEQALAVYDRDTPDRWHNIARAVGGG
                *:: :                     ** :::* ** *** .*::**:**:::*: : *.

AT2G18328.1     KSTEEVKRHYELLLRDVNDIESGRYPQPRYRNTN-------------------
pt037449_POPTR_ KSAEEVKRHYEILIKDVREIESGRVPFPNYRSSGNGN----------------
gm030637_Glyma1 KSADEVKRHYEILLEDLRHIESGRVPLPKYKSTGSSTN--VDEEE--------
Os022978_Os05t0 KSADEVRRHFDHLVEDVSRIESGRVPFPRYSSSSSSRG--ADDGNRSRYLKYQ
Sb008392_Sorbi1 KSADEVRRYYELLVKDVEHIEAGKVPFPAYRCPAGYDADRIDRSPALKHLKI-
                **::**:*::: *:.*:  **:*: * * *  .
BoxShade v3.31 C (beta, 970507) Output
AT2G18328.1     M A S S S M S T - - - - - - - - - - - - - - - - S S W T A R E D K Q F E M A L A K F D K D T P D R W Q K I A R A V - G G
pt037449_POPTR_    M S S N S L - - - - - - - - - - - - - - - - - - T S W T P K Q N K L F E K A L A L H D K D T P D R W H N V A K A V - G G
gm030637_Glyma1    M A S S S L S K Q K A S - - - - - - - - - - - D S S W T P K Q N K L F E K A L A K Y D K D T P E R W Q N V A K A V - G G
Os022978_Os05t0    M A S A A G S K Q Q Q A M M S L P S S R G G G G G G W T Q R Q N K Q F E C A L A V Y D K E T P D R W H N I A R Y M G G A
Sb008392_Sorbi1    M A T M S L S S T R - - - - - - - - - - - - - - A Q W T A K Q N K L F E Q A L A V Y D R D T P D R W H N I A R A V G G G
 
AT2G18328.1     K S T E E V K R H Y E L L L R D V N D I E S G R Y P Q P R Y R N T N - - - - - - - - - - - - - - - - - - -
pt037449_POPTR_    K S A E E V K R H Y E I L I K D V R E I E S G R V P F P N Y R S S G N G N - - - - - - - - - - - - - - - -
gm030637_Glyma1    K S A D E V K R H Y E I L L E D L R H I E S G R V P L P K Y K S T G S S T N - - V D E E E - - - - - - - -
Os022978_Os05t0    K S A D E V R R H F D H L V E D V S R I E S G R V P F P R Y S S S S S S R G - - A D D G N R S R Y L K Y Q
Sb008392_Sorbi1    K S A D E V R R Y Y E L L V K D V E H I E A G K V P F P A Y R C P A G Y D A D R I D R S P A L K H L K I -
 
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