fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18328.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037449 not found in 78aa AT4G39250.1 1st_not 0.688888888 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18328.1     MASSSMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDV
pt037449_POPTR_ MSSNSL--TSWTPKQNKLFEKALALHDKDTPDRWHNVAKAVGGKSAEEVKRHYEILIKDV
                *:*.*:  :***.:::* ** *** .********:::*:******:********:*::**

AT2G18328.1     NDIESGRYPQPRYRNTN---
pt037449_POPTR_ REIESGRVPFPNYRSSGNGN
                .:***** * *.**.:.
BoxShade v3.31 C (beta, 970507) Output
AT2G18328.1     M A S S S M S T S S W T A R E D K Q F E M A L A K F D K D T P D R W Q K I A R A V G G K S T E E V K R H Y E L L L R D V
pt037449_POPTR_    M S S N S L - - T S W T P K Q N K L F E K A L A L H D K D T P D R W H N V A K A V G G K S A E E V K R H Y E I L I K D V
 
AT2G18328.1     N D I E S G R Y P Q P R Y R N T N - - -
pt037449_POPTR_    R E I E S G R V P F P N Y R S S G N G N
 
0