fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18328.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os002918 not found in 85aa AT2G21650.1 not_not 0.6 III
Os022977 not found in 90aa AT1G75250.2 not_not 0.592592592 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18328.1     MASSSMSTS---SWTAREDKQFEMALAKFDKDTPDRWQKIARAV-GGKSTEEVKRHYELL
Os022977_Os05t0 MA----QQARA-QWPQKQNKLFEQALAVYDKETPDRWHNIARAVGGGKSAEDVKRYYEML
Os002918_Os01t0 MASMSVSSSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAV-AGKSADEVKLYYDLL
                **    . :   .*. :::: ** *** :*::**:**::***** .***:::** :*::*

AT2G18328.1     LRDVNDIESGRYPQPRYRNTN----------------
Os022977_Os05t0 EEDIKHIESGKVPFPAYRC--PAAAGYQAERLKHLKI
Os002918_Os01t0 VEDVKRIETGKVPFPAYRCPQPAIAG-----------
                 .*:: **:*: * * **
BoxShade v3.31 C (beta, 970507) Output
AT2G18328.1     M A S S S M S T S - - - S W T A R E D K Q F E M A L A K F D K D T P D R W Q K I A R A V - G G K S T E E V K R H Y E L L
Os022977_Os05t0    M A - - - - Q Q A R A - Q W P Q K Q N K L F E Q A L A V Y D K E T P D R W H N I A R A V G G G K S A E D V K R Y Y E M L
Os002918_Os01t0    M A S M S V S S S R A P Q W T A R Q N E Q F E R A L A V Y D R D T P E R W H N I A R A V - A G K S A D E V K L Y Y D L L
 
AT2G18328.1     L R D V N D I E S G R Y P Q P R Y R N T N - - - - - - - - - - - - - - - -
Os022977_Os05t0    E E D I K H I E S G K V P F P A Y R C - - P A A A G Y Q A E R L K H L K I
Os002918_Os01t0    V E D V K R I E T G K V P F P A Y R C P Q P A I A G - - - - - - - - - - -
 
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