fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18328.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os022978 not found in 111aa AT1G75250.1 1st_not 0.6 II
Os002918 not found in 85aa AT2G21650.1 not_not 0.6 III
Os022977 not found in 90aa AT1G75250.2 not_not 0.592592592 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G18328.1     MAS----------SSMSTS------SWTAREDKQFEMALAKFDKDTPDRWQKIARAV-GG
Os022977_Os05t0 MA--------------QQARA----QWPQKQNKLFEQALAVYDKETPDRWHNIARAVGGG
Os002918_Os01t0 MAS----------MSVSSSRA---PQWTARQNEQFERALAVYDRDTPERWHNIARAV-AG
Os022978_Os05t0 MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
                **                :       *. :::: ** *** :*::**:**::*** : ..

AT2G18328.1     KSTEEVKRHYELLLRDVNDIESGRYPQPRYRNTN-----------------
Os022977_Os05t0 KSAEDVKRYYEMLEEDIKHIESGKVPFPAYRC--PAAAGYQAERLKHLKI-
Os002918_Os01t0 KSADEVKLYYDLLVEDVKRIETGKVPFPAYRCPQPAIAG------------
Os022978_Os05t0 KSADEVRRHFDHLVEDVSRIESGRVPFPRYSSSSSSRGADDGNRSRYLKYQ
                **:::*: ::: * .*:. **:*: * * *
BoxShade v3.31 C (beta, 970507) Output
AT2G18328.1     M A S - - - - - - - - - - S S M S T S - - - - - - S W T A R E D K Q F E M A L A K F D K D T P D R W Q K I A R A V - G G
Os022977_Os05t0    M A - - - - - - - - - - - - - - Q Q A R A - - - - Q W P Q K Q N K L F E Q A L A V Y D K E T P D R W H N I A R A V G G G
Os002918_Os01t0    M A S - - - - - - - - - - M S V S S S R A - - - P Q W T A R Q N E Q F E R A L A V Y D R D T P E R W H N I A R A V - A G
Os022978_Os05t0    M A S A A G S K Q Q Q A M M S L P S S R G G G G G G W T Q R Q N K Q F E C A L A V Y D K E T P D R W H N I A R Y M G G A
 
AT2G18328.1     K S T E E V K R H Y E L L L R D V N D I E S G R Y P Q P R Y R N T N - - - - - - - - - - - - - - - - -
Os022977_Os05t0    K S A E D V K R Y Y E M L E E D I K H I E S G K V P F P A Y R C - - P A A A G Y Q A E R L K H L K I -
Os002918_Os01t0    K S A D E V K L Y Y D L L V E D V K R I E T G K V P F P A Y R C P Q P A I A G - - - - - - - - - - - -
Os022978_Os05t0    K S A D E V R R H F D H L V E D V S R I E S G R V P F P R Y S S S S S S R G A D D G N R S R Y L K Y Q
 
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