fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18328.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008392 not found in 98aa AT2G21650.1 1st_not 0.607407407 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18328.1     MASSSMSTS--SWTAREDKQFEMALAKFDKDTPDRWQKIARAV-GGKSTEEVKRHYELLL
Sb008392_Sorbi1 MATMSLSSTRAQWTAKQNKLFEQALAVYDRDTPDRWHNIARAVGGGKSADEVRRYYELLV
                **: *:*::  .***:::* ** *** :*:******::***** ****::**:*:****:

AT2G18328.1     RDVNDIESGRYPQPRYRNTN------------------
Sb008392_Sorbi1 KDVEHIEAGKVPFPAYRCPAGYDADRIDRSPALKHLKI
                :**:.**:*: * * ** .
BoxShade v3.31 C (beta, 970507) Output
AT2G18328.1     M A S S S M S T S - - S W T A R E D K Q F E M A L A K F D K D T P D R W Q K I A R A V - G G K S T E E V K R H Y E L L L
Sb008392_Sorbi1    M A T M S L S S T R A Q W T A K Q N K L F E Q A L A V Y D R D T P D R W H N I A R A V G G G K S A D E V R R Y Y E L L V
 
AT2G18328.1     R D V N D I E S G R Y P Q P R Y R N T N - - - - - - - - - - - - - - - - - -
Sb008392_Sorbi1    K D V E H I E A G K V P F P A Y R C P A G Y D A D R I D R S P A L K H L K I
 
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