fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18328.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033118 not found in 238aa AT1G75250.1 not_not 0.6 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18328.1     -----------------------------------------------------MASSSMS
Sb033118_Sorbi1 FLLSHHYLQLQLGPLHACCPINPIYTHVCIFWIIDRSSYYVHHLRRSSDVSACMSGGPVA
                                                                     *:...::

AT2G18328.1     TSSWTAREDKQFEMALAKFDKD---------TPDRWQKIARAVG-GKSTEEVKR------
Sb033118_Sorbi1 GGAAVGREGH-----LAGLDVADVLLQQVVVAPDVLGGLAAADGAGDVVPPVRRVLVVNG
                 .: ..**.:     ** :*           :**    :* * * *. .  *:*      

AT2G18328.1     -----HYELLLRDVNDIESGRYPQPRYRNTN----------
Sb033118_Sorbi1 QRLLEQLVLLRRPLRARRCARHRLHRRHSVAFLELAREEGS
                     :  ** * :.  ...*:   * :..
BoxShade v3.31 C (beta, 970507) Output
AT2G18328.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S S M S
Sb033118_Sorbi1    F L L S H H Y L Q L Q L G P L H A C C P I N P I Y T H V C I F W I I D R S S Y Y V H H L R R S S D V S A C M S G G P V A
 
AT2G18328.1     T S S W T A R E D K Q F E M A L A K F D K D - - - - - - - - - T P D R W Q K I A R A V G - G K S T E E V K R - - - - - -
Sb033118_Sorbi1    G G A A V G R E G H - - - - - L A G L D V A D V L L Q Q V V V A P D V L G G L A A A D G A G D V V P P V R R V L V V N G
 
AT2G18328.1     - - - - - H Y E L L L R D V N D I E S G R Y P Q P R Y R N T N - - - - - - - - - -
Sb033118_Sorbi1    Q R L L E Q L V L L R R P L R A R R C A R H R L H R R H S V A F L E L A R E E G S
 
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