fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002973 not found in 204aa AT4G36740.1 1st_not 0.5225 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18550.1     MNNQNVDDHNLLLISQLYPNVYTPLVPQQGGEAKPTRRRKRKSKSVVVAEEGENEGNGWF
pt002973_POPTR_ -MNHKVEDH-IALISQLYPGLYTQMVPKQ-GESKPRRRRKKNT----------GEGVSGA
                  *::*:** : *******.:** :**:* **:** ****:::          .** .  

AT2G18550.1     RKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVED
pt002973_POPTR_ RKRKLSAEQVNFLEMNFGDEHKLETERKDKLASDLGLDPRQVAVWFQNRRARWKNKKLEE
                ****** ***.:**:.* *:****:****:***:**********************::*:

AT2G18550.1     EYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIE
pt002973_POPTR_ EYTKLKTAHESIVVQKCQLESEVLKLKEQLSRTEKEIQRLSDRADRVSTNSP-SSSLSMA
                ******.*:*: **:**:*:***::***** .:*:*****:.*.: . :*** ***::: 

AT2G18550.1     ANHTTPFFGDYDIGFDGEADENLLYSP---DYIDGLDWMSQFM
pt002973_POPTR_ IEH--PFLGEFAV-LEGYGDA--FYMPPENNYIPGMEWISQYM
                 :*  **:*:: : ::* .*   :* *   :** *::*:**:*
BoxShade v3.31 C (beta, 970507) Output
AT2G18550.1     M N N Q N V D D H N L L L I S Q L Y P N V Y T P L V P Q Q G G E A K P T R R R K R K S K S V V V A E E G E N E G N G W F
pt002973_POPTR_    - M N H K V E D H - I A L I S Q L Y P G L Y T Q M V P K Q - G E S K P R R R R K K N T - - - - - - - - - - G E G V S G A
 
AT2G18550.1     R K R K L S D E Q V R M L E I S F E D D H K L E S E R K D R L A S E L G L D P R Q V A V W F Q N R R A R W K N K R V E D
pt002973_POPTR_    R K R K L S A E Q V N F L E M N F G D E H K L E T E R K D K L A S D L G L D P R Q V A V W F Q N R R A R W K N K K L E E
 
AT2G18550.1     E Y T K L K N A Y E T T V V E K C R L D S E V I H L K E Q L Y E A E R E I Q R L A K R V E G T L S N S P I S S S V T I E
pt002973_POPTR_    E Y T K L K T A H E S I V V Q K C Q L E S E V L K L K E Q L S R T E K E I Q R L S D R A D R V S T N S P - S S S L S M A
 
AT2G18550.1     A N H T T P F F G D Y D I G F D G E A D E N L L Y S P - - - D Y I D G L D W M S Q F M
pt002973_POPTR_    I E H - - P F L G E F A V - L E G Y G D A - - F Y M P P E N N Y I P G M E W I S Q Y M
 
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