fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G18550.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030030 not found in 215aa AT4G36740.1 not_not 0.4575 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G18550.1     MNNQNVDDHNLLLISQLYP-NVYTPLVPQQG-GEAKPTRRRKRKSKSVVVAEEGENEGNG
gm030030_Glyma1 MNHRPPFQDHMMLMSQLFPADAYTQIISQQGETNKKPRRRRNKKNKG---GENGASEAN-
                **::   :.:::*:***:* :.** ::.***  : ** ***::*.*.   .*:* .*.* 

AT2G18550.1     WFRKRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRV
gm030030_Glyma1 --KKRKLSEVQVNLLEQNFGNERKLESERKDRLAMELGLDPRQVAVWFQNRRARWKNKKL
                  :*****: **.:** .* :::*********** ***********************::

AT2G18550.1     EDEYTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISS-SV
gm030030_Glyma1 EEEYSSLKKNHEATLLEKCCLESEVLKLKEQLSEAEKEIQRLLESAERVPSNSSSSSQSQ
                *:**:.**: :*:*::*** *:***::***** ***:***** : .* . ***. ** * 

AT2G18550.1     TIEANHTTPFFGDYDIGFDGEADENLLYSPD--YIDGLDWMSQFM
gm030030_Glyma1 SMEAV-DPPFFGEF--GVDGYEDD-VFYVPETHYINGMEWINLYM
                ::**   .****::  *.**  *: ::* *:  **:*::*:. :*
BoxShade v3.31 C (beta, 970507) Output
AT2G18550.1     M N N Q N V D D H N L L L I S Q L Y P - N V Y T P L V P Q Q G - G E A K P T R R R K R K S K S V V V A E E G E N E G N G
gm030030_Glyma1    M N H R P P F Q D H M M L M S Q L F P A D A Y T Q I I S Q Q G E T N K K P R R R R N K K N K G - - - G E N G A S E A N -
 
AT2G18550.1     W F R K R K L S D E Q V R M L E I S F E D D H K L E S E R K D R L A S E L G L D P R Q V A V W F Q N R R A R W K N K R V
gm030030_Glyma1    - - K K R K L S E V Q V N L L E Q N F G N E R K L E S E R K D R L A M E L G L D P R Q V A V W F Q N R R A R W K N K K L
 
AT2G18550.1     E D E Y T K L K N A Y E T T V V E K C R L D S E V I H L K E Q L Y E A E R E I Q R L A K R V E G T L S N S P I S S - S V
gm030030_Glyma1    E E E Y S S L K K N H E A T L L E K C C L E S E V L K L K E Q L S E A E K E I Q R L L E S A E R V P S N S S S S S Q S Q
 
AT2G18550.1     T I E A N H T T P F F G D Y D I G F D G E A D E N L L Y S P D - - Y I D G L D W M S Q F M
gm030030_Glyma1    S M E A V - D P P F F G E F - - G V D G Y E D D - V F Y V P E T H Y I N G M E W I N L Y M
 
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