fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G20180.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035839 not found in 478aa AT2G20180.2 1st_1st 0.236918604 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G20180.2     MHHFVPDFDTDDDYVNNHNSSLNHLPRKSITTMGEDDDLMELLWQNGQVVVQNQRLHTKK
gm035839_Glyma1 ---------------------------------------MELLWQNGQVVMQSQ---NQR
                                                       ***********:*.*   .::

AT2G20180.2     PSSSPPKLLP--------SMDPQQQPSSD-------QNLFIQEDEMTSWLHYPLRDD---
gm035839_Glyma1 PFRKPPQ--PPEANGGDGAISAREIRSSEAENYNNSQHLFMQEDEMAAWLHYPIHEDPPP
                *  .**:  *        ::..::  **:       *:**:*****::*****:::*   

AT2G20180.2     ----DFCSDLLFSAAPTATATATVSQVTAA---------------RPPVSSTNESRPPVR
gm035839_Glyma1 FDHHDFGADIFY---PPPNATASQNRGSAAVQSSFRTTELWHPAPRPPIP------PPRR
                    ** :*:::   *...***: .: :**               ***:.      ** *

AT2G20180.2     ---------NFMNFSRLRGDFNNGRGGESGPLLSKAVVRESTQVSPSATPSAAA--SESG
gm035839_Glyma1 PEHAPSRIHNFAHFTK------HGNASSSS---KAAAAAQPTVVDSCETPVATAEHAETG
                         ** :*::      :*....*.   . *.. :.* *... ** *:*  :*:*

AT2G20180.2     LTRRTDGTDSSAVAGGGAYNRKGKAVAMTAPAIEITGTSSSVVSKSEIEP-EKTNVDDRK
gm035839_Glyma1 RAR--------AAAGKTAVSDGGRETA----TCDVTVTSSPGDSSGSAEPVEREPMADRK
                 :*        *.**  * .  *: .*    : ::* ***.  *... ** *:  : ***

AT2G20180.2     RKEREATTTDETESRSE-------ETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERM
gm035839_Glyma1 RKGREH---EESEFQSEDVDFESPEAKKQVHGSTSTKRSRAAEVHNLSERRRRDRINEKM
                ** **    :*:* :**       *:*:   .:*****************:*******:*

AT2G20180.2     KALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMMSMGCGMMPMMYPGMQQYMPHMA--
gm035839_Glyma1 KALQELIPRCNKSDKASMLDEAIEYLKSLQLQVQMMSMGYGMVPMMFPGIQQYMPPMGMG
                *************************:******:****** **:***:**:***** *.  

AT2G20180.2     --------MGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYP--------VHA
gm035839_Glyma1 IGMGMGMEMGMGMNRPV-----MPFTNMLASS-TLPAATAAVHLGPRFPMPPFHMPHVAA
                        ******:*:     ***.****:. .**: *  .  **::*        * *

AT2G20180.2     SDPSRVFVPNQ----------QYDPTSGQPQYPAGYTDPYQQFRGLHPTQPPQFQ---NQ
gm035839_Glyma1 PDSSRMQGANHPDNNMLNSLGTLDPD--QSRIP-NFTDPYQQYLGLQQAQLQLMQTMNQQ
                .*.**:  .*:            **   *.: * .:******: **: :*   :*   :*

AT2G20180.2     ATSYPSSSRVSSSKESEDHGNHTTG----
gm035839_Glyma1 NVSKPSSSRGQENPE-----KHQSGKVPL
                 .* ***** ... *     :* :*
BoxShade v3.31 C (beta, 970507) Output
AT2G20180.2     M H H F V P D F D T D D D Y V N N H N S S L N H L P R K S I T T M G E D D D L M E L L W Q N G Q V V V Q N Q R L H T K K
gm035839_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E L L W Q N G Q V V M Q S Q - - - N Q R
 
AT2G20180.2     P S S S P P K L L P - - - - - - - - S M D P Q Q Q P S S D - - - - - - - Q N L F I Q E D E M T S W L H Y P L R D D - - -
gm035839_Glyma1    P F R K P P Q - - P P E A N G G D G A I S A R E I R S S E A E N Y N N S Q H L F M Q E D E M A A W L H Y P I H E D P P P
 
AT2G20180.2     - - - - D F C S D L L F S A A P T A T A T A T V S Q V T A A - - - - - - - - - - - - - - - R P P V S S T N E S R P P V R
gm035839_Glyma1    F D H H D F G A D I F Y - - - P P P N A T A S Q N R G S A A V Q S S F R T T E L W H P A P R P P I P - - - - - - P P R R
 
AT2G20180.2     - - - - - - - - - N F M N F S R L R G D F N N G R G G E S G P L L S K A V V R E S T Q V S P S A T P S A A A - - S E S G
gm035839_Glyma1    P E H A P S R I H N F A H F T K - - - - - - H G N A S S S S - - - K A A A A A Q P T V V D S C E T P V A T A E H A E T G
 
AT2G20180.2     L T R R T D G T D S S A V A G G G A Y N R K G K A V A M T A P A I E I T G T S S S V V S K S E I E P - E K T N V D D R K
gm035839_Glyma1    R A R - - - - - - - - A A A G K T A V S D G G R E T A - - - - T C D V T V T S S P G D S S G S A E P V E R E P M A D R K
 
AT2G20180.2     R K E R E A T T T D E T E S R S E - - - - - - - E T K Q A R V S T T S T K R S R A A E V H N L S E R K R R D R I N E R M
gm035839_Glyma1    R K G R E H - - - E E S E F Q S E D V D F E S P E A K K Q V H G S T S T K R S R A A E V H N L S E R R R R D R I N E K M
 
AT2G20180.2     K A L Q E L I P R C N K S D K A S M L D E A I E Y M K S L Q L Q I Q M M S M G C G M M P M M Y P G M Q Q Y M P H M A - -
gm035839_Glyma1    K A L Q E L I P R C N K S D K A S M L D E A I E Y L K S L Q L Q V Q M M S M G Y G M V P M M F P G I Q Q Y M P P M G M G
 
AT2G20180.2     - - - - - - - - M G M G M N Q P I P P P S F M P F P N M L A A Q R P L P T Q T H M A G S G P Q Y P - - - - - - - - V H A
gm035839_Glyma1    I G M G M G M E M G M G M N R P V - - - - - M P F T N M L A S S - T L P A A T A A V H L G P R F P M P P F H M P H V A A
 
AT2G20180.2     S D P S R V F V P N Q - - - - - - - - - - Q Y D P T S G Q P Q Y P A G Y T D P Y Q Q F R G L H P T Q P P Q F Q - - - N Q
gm035839_Glyma1    P D S S R M Q G A N H P D N N M L N S L G T L D P D - - Q S R I P - N F T D P Y Q Q Y L G L Q Q A Q L Q L M Q T M N Q Q
 
AT2G20180.2     A T S Y P S S S R V S S S K E S E D H G N H T T G - - - -
gm035839_Glyma1    N V S K P S S S R G Q E N P E - - - - - K H Q S G K V P L
 
0