fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G20825.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt012582 not found in 235aa AT4G28190.1 not_not 0.725252525 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G20825.1     ----MERECGSKELFSKEELQEISGVHVGDDYVEVMCGCTSHRYGDAVARLKIFSDGELQ
pt012582_POPTR_ MANGVEREL--VVLFSEEELREMSGVKRGEEYIEVTCGCTSHRYGDAVGRLRVFINGELE
                    :***     ***:***:*:***: *::*:** ************.**::* :***:

AT2G20825.1     ITCQCTPACLEDKLTPAAFEKHSERETSRNWRNNVWVFIEGDKVPLSKTVLLRYYNKALK
pt012582_POPTR_ ITCECTPGCDEDTMTPAAFEKHSGRETARKWKNNVWVIVNGEKVPLSKTVLLKYYNQASK
                ***:***.* **.:********* ***:*:*:*****:::*:**********:***:* *

AT2G20825.1     N------SNVSKVIHRDEFVGCSTCGKERRFRLRSRGECRMHHDAIAEPNWKCCDYPYDK
pt012582_POPTR_ NGNGSHRSNNGRVCHRDEFVRCSKCNKERRFRLRTKEECQIHHDALADANWKCADMPFDK
                *      ** .:* ****** **.*.********:: **::****:*:.****.* *:**

AT2G20825.1     ITCEEEEERGSRKVFRGCTRSPSCKGCTSCVCFGCKLCRFSDCNCQTCLDFTTNAKPI
pt012582_POPTR_ ITCDDDEERASRRVYRGCTRSPTCKGCTSCVCFGCEICRFSDCSCQTCTDFTRNAKV-
                ***:::***.**:*:*******:************::******.**** *** ***
BoxShade v3.31 C (beta, 970507) Output
AT2G20825.1     - - - - M E R E C G S K E L F S K E E L Q E I S G V H V G D D Y V E V M C G C T S H R Y G D A V A R L K I F S D G E L Q
pt012582_POPTR_    M A N G V E R E L - - V V L F S E E E L R E M S G V K R G E E Y I E V T C G C T S H R Y G D A V G R L R V F I N G E L E
 
AT2G20825.1     I T C Q C T P A C L E D K L T P A A F E K H S E R E T S R N W R N N V W V F I E G D K V P L S K T V L L R Y Y N K A L K
pt012582_POPTR_    I T C E C T P G C D E D T M T P A A F E K H S G R E T A R K W K N N V W V I V N G E K V P L S K T V L L K Y Y N Q A S K
 
AT2G20825.1     N - - - - - - S N V S K V I H R D E F V G C S T C G K E R R F R L R S R G E C R M H H D A I A E P N W K C C D Y P Y D K
pt012582_POPTR_    N G N G S H R S N N G R V C H R D E F V R C S K C N K E R R F R L R T K E E C Q I H H D A L A D A N W K C A D M P F D K
 
AT2G20825.1     I T C E E E E E R G S R K V F R G C T R S P S C K G C T S C V C F G C K L C R F S D C N C Q T C L D F T T N A K P I
pt012582_POPTR_    I T C D D D E E R A S R R V Y R G C T R S P T C K G C T S C V C F G C E I C R F S D C S C Q T C T D F T R N A K V -
 
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