fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G20825.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033370 not found in 236aa AT4G28190.1 not_not 0.717171717 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G20825.1     ----MERECGSKELFSKEELQEISGVHVGDDYVEVMCGCTSHRYGDAVARLKIFSDGELQ
gm033370_Glyma1 MANGLERESGLT-LFSEEELREVSGVKRVGDYVEVTCGCTSHRYGDAVGRLRVFVNGYLE
                    :***.* . ***:***:*:***:  .***** ************.**::* :* *:

AT2G20825.1     ITCQCTPACLEDKLTPAAFEKHSERETSRNWRNNVWVFIEGDKVPLSKTVLLRYYNKALK
gm033370_Glyma1 ITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSK
                ***:***.* ******:****** ***:*:*:*****:::*:****.*****:***:. *

AT2G20825.1     NSNVS------KVIHRDEFVGCSTCGKERRFRLRSRGECRMHHDAIAEPNWKCCDYPYDK
gm033370_Glyma1 AANGSHRSHNGRACHRDEFVRCTSCNKERRFRLRTKEECRIHHDALADANWKCSDLPYDK
                 :* *      :. ****** *::*.********:: ***:****:*:.****.* ****

AT2G20825.1     ITCEEEEERGSRKVFRGCTRSPSCKGCTSCVCFGCKLCRFSDCNCQTCLDFTTNAKPI
gm033370_Glyma1 ITCDDEEERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCADFTNNAKA-
                ***::****.**:*:*******:************.:******.**** ***.***.
BoxShade v3.31 C (beta, 970507) Output
AT2G20825.1     - - - - M E R E C G S K E L F S K E E L Q E I S G V H V G D D Y V E V M C G C T S H R Y G D A V A R L K I F S D G E L Q
gm033370_Glyma1    M A N G L E R E S G L T - L F S E E E L R E V S G V K R V G D Y V E V T C G C T S H R Y G D A V G R L R V F V N G Y L E
 
AT2G20825.1     I T C Q C T P A C L E D K L T P A A F E K H S E R E T S R N W R N N V W V F I E G D K V P L S K T V L L R Y Y N K A L K
gm033370_Glyma1    I T C E C T P G C Q E D K L T P S A F E K H S G R E T A R K W K N N V W V I V N G E K V P L C K T V L L K Y Y N Q V S K
 
AT2G20825.1     N S N V S - - - - - - K V I H R D E F V G C S T C G K E R R F R L R S R G E C R M H H D A I A E P N W K C C D Y P Y D K
gm033370_Glyma1    A A N G S H R S H N G R A C H R D E F V R C T S C N K E R R F R L R T K E E C R I H H D A L A D A N W K C S D L P Y D K
 
AT2G20825.1     I T C E E E E E R G S R K V F R G C T R S P S C K G C T S C V C F G C K L C R F S D C N C Q T C L D F T T N A K P I
gm033370_Glyma1    I T C D D E E E R A S R R V Y R G C T R S P T C K G C T S C V C F G C D I C R F S D C S C Q T C A D F T N N A K A -
 
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