fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G20880.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034260 not found in 406aa AT2G20880.1 1st_1st 0.341836734 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G20880.1     MATAKNKGKSIRVLGTSEAEKKDEMELEEEFQFSSGKYKD-SGPGSDMW---LGDASSTS
gm034260_Glyma1 MAAA-NSGKFD--VGDETHKNSRKGSESQDWEIEKGKCVDCSSSQRRQWKPVFDDVSISY
                **:* *.**    :* .  ::. : . .:::::..**  * *..    *   :.*.* : 

AT2G20880.1     PRSLRKTRTFDRHNPYLVSSYAT-----------PQPPTTTTCSVSFPFYLPPAIQNQQR
gm034260_Glyma1 NRPFKKIRSPDRQNTNQSSSSSSSSSSSSSIPFQPSPLSNPPSRIVFPFAFDGSQQHPMQ
                 *.::* *: **:*.   ** ::           *.* :.... : *** :  : *:  :

AT2G20880.1     FLH---------PNDPSGQRQQ-QMISF-DPQQQVQPYVAQQQQQQQH---LLQYWRDIL
gm034260_Glyma1 FPHQFGTTNPPFPH-PSLQNQQHQMISFGDSSSLLHQHHHHQQQHQQHQQQLLQYWSDAL
                * *         *: ** *.** ***** *... :: :  :***:***   ***** * *

AT2G20880.1     KLSPSGRMMMMNMLRQESDLPLTRPPVQPFSATKLYRGVRQRHWGKWVAEIRKPRNRTRL
gm034260_Glyma1 NLSPRG---MLTRLGPDGR-PLFRLPTQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRL
                :*** *   *:. *  :.  ** * *.**:.:******************** *******

AT2G20880.1     WLGTFDTAEEAAMAYDREAFKLRGETARLNFPELFLNKQEPTPVHQKQCETGT-------
gm034260_Glyma1 WLGTFDTAEDAAMAYDREAFKLRGENARLNFPELFLNKDKKEEQQQQEQEASSPVLSAIA
                *********:***************.************::    :*:: *:.:       

AT2G20880.1     -TSEDSSRR--------GEDDS-----------STALAVGGVSEETGWAE--AWFNAIPE
gm034260_Glyma1 KQHEPSSEHRDVPIEESNENDSGDATVSDDQVHATTESSEGVSQEMVWGEMSAWFNAIPA
                   * **.:        .*:**           :*: :  ***:*  *.*  ******* 

AT2G20880.1     EWGPGSPLWDDY----------HFPISN-HKDDLDATQNSSSDTI---------
gm034260_Glyma1 AWGPGSPMWDDLDATNNLLCQSHIPFSNPNQQELNDAERQEQNTGPGYLWKDQD
                 ******:***           *:*:** ::::*: ::....:*
BoxShade v3.31 C (beta, 970507) Output
AT2G20880.1     M A T A K N K G K S I R V L G T S E A E K K D E M E L E E E F Q F S S G K Y K D - S G P G S D M W - - - L G D A S S T S
gm034260_Glyma1    M A A A - N S G K F D - - V G D E T H K N S R K G S E S Q D W E I E K G K C V D C S S S Q R R Q W K P V F D D V S I S Y
 
AT2G20880.1     P R S L R K T R T F D R H N P Y L V S S Y A T - - - - - - - - - - - P Q P P T T T T C S V S F P F Y L P P A I Q N Q Q R
gm034260_Glyma1    N R P F K K I R S P D R Q N T N Q S S S S S S S S S S S S S I P F Q P S P L S N P P S R I V F P F A F D G S Q Q H P M Q
 
AT2G20880.1     F L H - - - - - - - - - P N D P S G Q R Q Q - Q M I S F - D P Q Q Q V Q P Y V A Q Q Q Q Q Q Q H - - - L L Q Y W R D I L
gm034260_Glyma1    F P H Q F G T T N P P F P H - P S L Q N Q Q H Q M I S F G D S S S L L H Q H H H H Q Q Q H Q Q H Q Q Q L L Q Y W S D A L
 
AT2G20880.1     K L S P S G R M M M M N M L R Q E S D L P L T R P P V Q P F S A T K L Y R G V R Q R H W G K W V A E I R K P R N R T R L
gm034260_Glyma1    N L S P R G - - - M L T R L G P D G R - P L F R L P T Q P I N T T K L Y R G V R Q R H W G K W V A E I R L P R N R T R L
 
AT2G20880.1     W L G T F D T A E E A A M A Y D R E A F K L R G E T A R L N F P E L F L N K Q E P T P V H Q K Q C E T G T - - - - - - -
gm034260_Glyma1    W L G T F D T A E D A A M A Y D R E A F K L R G E N A R L N F P E L F L N K D K K E E Q Q Q Q E Q E A S S P V L S A I A
 
AT2G20880.1     - T S E D S S R R - - - - - - - - G E D D S - - - - - - - - - - - S T A L A V G G V S E E T G W A E - - A W F N A I P E
gm034260_Glyma1    K Q H E P S S E H R D V P I E E S N E N D S G D A T V S D D Q V H A T T E S S E G V S Q E M V W G E M S A W F N A I P A
 
AT2G20880.1     E W G P G S P L W D D Y - - - - - - - - - - H F P I S N - H K D D L D A T Q N S S S D T I - - - - - - - - -
gm034260_Glyma1    A W G P G S P M W D D L D A T N N L L C Q S H I P F S N P N Q Q E L N D A E R Q E Q N T G P G Y L W K D Q D
 
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