fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm003937 not found in 111aa AT2G21320.1 1st_1st 0.443243243 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
Sm003937_Selmo1 MRTLCDVCESAPARLFCAADEAALCSKCDEKVHGCNKLASRHVRLQLAEARAVPRCDICE
                ** ***.****.* :**********..****** ********:*: **:.  .* *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK
Sm003937_Selmo1 SAPAFFYCGIDGTSLCLQCDMDVHTGGKKTHERYLMLGQRVEVI---------TGLLASR
                .******* ***:******** **.***:**.*:*:* **:*.           ** ..:

AT2G21320.1     ASSGRGQESNGNGDHDHNMIDLNSNPQRVHEPGSHNQEEGIDVNNANNHEHE
Sm003937_Selmo1 ----------------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
Sm003937_Selmo1    M R T L C D V C E S A P A R L F C A A D E A A L C S K C D E K V H G C N K L A S R H V R L Q L A E A R A V P R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K P N H A D Q L G L R C Q K
Sm003937_Selmo1    S A P A F F Y C G I D G T S L C L Q C D M D V H T G G K K T H E R Y L M L G Q R V E V I - - - - - - - - - T G L L A S R
 
AT2G21320.1     A S S G R G Q E S N G N G D H D H N M I D L N S N P Q R V H E P G S H N Q E E G I D V N N A N N H E H E
Sm003937_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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