fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp004666 NQPRMIDLNSRPKRLQS in 201/220 AT4G38960.1 1st_not 0.451351351 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
pp004666_Pp1s20 MRTLCDVCEAAPARLFCAADEAALCLKCDEKVHSCNKLANRHVRLELAESRAVPRCDICE
                ** ***.**:*.* :********** .******.*****.**:*: **:.  .* *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDK-------------
pp004666_Pp1s20 NAPAFFFCGVDGTSLCLQCDMDVHVGGKKAHERYLMMGQRVELPSRKLRFEDNVDTEKLP
                ******:* :**:******** ******::*.*:*:: **:*:*. *             

AT2G21320.1     --------------PN---------------HADQL--GLRCQKASSGRGQESNG-----
pp004666_Pp1s20 AEPSNAPTDKNGVLPDHHHHHHYHHHHHHHHHEDEVRAGLPAPKQSCDR-DASNAPAIAI
                              *:               * *::  ** . * *..* : **.     

AT2G21320.1     -NGDHDH------------NMIDLNSNPQRVHEPGSHNQEEGIDVNNANNHEHE
pp004666_Pp1s20 TAGDEESLLIDGCIHQNQPRMIDLNSRPKRLQSQAS-VPDKG------------
                  **.:             .******.*:*::. .*   ::*
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
pp004666_Pp1s20    M R T L C D V C E A A P A R L F C A A D E A A L C L K C D E K V H S C N K L A N R H V R L E L A E S R A V P R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K - - - - - - - - - - - - -
pp004666_Pp1s20    N A P A F F F C G V D G T S L C L Q C D M D V H V G G K K A H E R Y L M M G Q R V E L P S R K L R F E D N V D T E K L P
 
AT2G21320.1     - - - - - - - - - - - - - - P N - - - - - - - - - - - - - - - H A D Q L - - G L R C Q K A S S G R G Q E S N G - - - - -
pp004666_Pp1s20    A E P S N A P T D K N G V L P D H H H H H H Y H H H H H H H H H E D E V R A G L P A P K Q S C D R - D A S N A P A I A I
 
AT2G21320.1     - N G D H D H - - - - - - - - - - - - N M I D L N S N P Q R V H E P G S H N Q E E G I D V N N A N N H E H E
pp004666_Pp1s20    T A G D E E S L L I D G C I H Q N Q P R M I D L N S R P K R L Q S Q A S - V P D K G - - - - - - - - - - - -
 
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