fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp035016 NQSRMIDLNSRPKRLQN in 202/221 AT4G38960.1 not_not 0.451351351 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
pp035016_Pp1s31 MRTLCDVCEAAPARLFCAADEAALCLKCDEKVHSCNKLAYRHVRLELAESRPVPRCDICE
                ** ***.**:*.* :********** .******.***** **:*: **:.  .* *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDK-------------
pp035016_Pp1s31 NAPAFFFCGVDGTSLCLQCDMDVHVGGKKAHERYLMMRQRVELPSRKLRFEDTVDTEKPT
                ******:* :**:******** ******::*.*:*::***:*:*. *             

AT2G21320.1     --PN----------------------------HADQL--GLRCQKASSGRGQESNGN---
pp035016_Pp1s31 AEPNSVPADKNGTLLPDQHHHHHYHHHHHHHHHEDELRAGLPASKPSCDR---DNSNAPA
                  **                            * *:*  ** ..*.*..*   .*.*   

AT2G21320.1     -----GDHD------------HNMIDLNSNPQRVHEPGSHNQEEGIDVNNANNHEHE
pp035016_Pp1s31 IAIAAGDEESLLLDDCLVQNQSRMIDLNSRPKRL-----QNQASVPDKG--------
                     **.:             .******.*:*:     :** .  * .
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
pp035016_Pp1s31    M R T L C D V C E A A P A R L F C A A D E A A L C L K C D E K V H S C N K L A Y R H V R L E L A E S R P V P R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K - - - - - - - - - - - - -
pp035016_Pp1s31    N A P A F F F C G V D G T S L C L Q C D M D V H V G G K K A H E R Y L M M R Q R V E L P S R K L R F E D T V D T E K P T
 
AT2G21320.1     - - P N - - - - - - - - - - - - - - - - - - - - - - - - - - - - H A D Q L - - G L R C Q K A S S G R G Q E S N G N - - -
pp035016_Pp1s31    A E P N S V P A D K N G T L L P D Q H H H H H Y H H H H H H H H H E D E L R A G L P A S K P S C D R - - - D N S N A P A
 
AT2G21320.1     - - - - - G D H D - - - - - - - - - - - - H N M I D L N S N P Q R V H E P G S H N Q E E G I D V N N A N N H E H E
pp035016_Pp1s31    I A I A A G D E E S L L L D D C L V Q N Q S R M I D L N S R P K R L - - - - - Q N Q A S V P D K G - - - - - - - -
 
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