fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt018983 MDNKLIDLNARPQRVHG in 166/203 AT4G38960.1 not_not 0.602702702 III
Pt037453 VDKKMIDLNMKPQRTDH in 165/185 AT4G38960.1 not_not 0.602702702 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
pt037453_POPTR_ MRTLCDACESAAAIVFCAADEAALCLACDEKVHMCNKLASRHVRVGLANPSDVPRCDICE
pt018983_POPTR_ MRMLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPQCDICE
                ** ***.*******:********** :****** ********:*****:**:.* *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLR-CQ
pt037453_POPTR_ NAPAFFYCETDGSSLCLQCDMTVHVGGKRTHGRYLLLRQRVEFPGDKPQ-PDDLHSQPMH
pt018983_POPTR_ KAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGCTEEQGQQPLD
                :******** *********** ********* *:******:*******  .::   :  .

AT2G21320.1     KASSGRGQ-------------------------ESNGNGDHDHNMIDLNSNPQRV-HEPG
pt037453_POPTR_ PGETRKGQNQPPKATAEEKRQNRQVSPAPMSLSNSDGHDKVDKKMIDLNMKPQRTDHEQA
pt018983_POPTR_ DNETRRDQNQPPKLTARENQQNHRASPVPMVENNTDSDGKMDNKLIDLNARPQRV-HGKN
                  .: :.*                         :::.... *:::**** .***. *   

AT2G21320.1     SHNQEEGIDVNNANNHEHE--------------
pt037453_POPTR_ SNNQE---------L------------------
pt018983_POPTR_ PTNQE---------NHESSSLAPFGFFKGEPQK
                . ***
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
pt037453_POPTR_    M R T L C D A C E S A A A I V F C A A D E A A L C L A C D E K V H M C N K L A S R H V R V G L A N P S D V P R C D I C E
pt018983_POPTR_    M R M L C D V C E S A A A I L F C A A D E A A L C R S C D E K V H M C N K L A S R H V R V G L A D P S D V P Q C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K P N H A D Q L G L R - C Q
pt037453_POPTR_    N A P A F F Y C E T D G S S L C L Q C D M T V H V G G K R T H G R Y L L L R Q R V E F P G D K P Q - P D D L H S Q P M H
pt018983_POPTR_    K A P A F F Y C E I D G S S L C L Q C D M I V H V G G K R T H G R Y L L L R Q R V E F P G D K P G C T E E Q G Q Q P L D
 
AT2G21320.1     K A S S G R G Q - - - - - - - - - - - - - - - - - - - - - - - - - E S N G N G D H D H N M I D L N S N P Q R V - H E P G
pt037453_POPTR_    P G E T R K G Q N Q P P K A T A E E K R Q N R Q V S P A P M S L S N S D G H D K V D K K M I D L N M K P Q R T D H E Q A
pt018983_POPTR_    D N E T R R D Q N Q P P K L T A R E N Q Q N H R A S P V P M V E N N T D S D G K M D N K L I D L N A R P Q R V - H G K N
 
AT2G21320.1     S H N Q E E G I D V N N A N N H E H E - - - - - - - - - - - - - -
pt037453_POPTR_    S N N Q E - - - - - - - - - L - - - - - - - - - - - - - - - - - -
pt018983_POPTR_    P T N Q E - - - - - - - - - N H E S S S L A P F G F F K G E P Q K
 
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