fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034540 IDSKMIDLNMRPVRTHG in 166/211 AT4G38960.1 1st_not 0.608108108 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
Os034540_Os09t0 MRTICDVCESAPAVLFCVADEAALCRSCDEKVHMCNKLARRHVRVGLADPNKVQRCDICE
                ** :**.****.*::**.******* ******* ***** **:*******.:.  *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK
Os034540_Os09t0 NAPAFFYCEIDGTSLCLSCDMTVHVGGKRTHGRYLLLRQRVEFPGDKPGHMDDVAMQ-QK
                ************:****.***.********* *:******:*******.* *::.:: **

AT2G21320.1     ASSGRGQE-----------------------SNGN----GDHDHNMIDLNSNPQRVHEPG
Os034540_Os09t0 DPENRTDQKKAPHSVTKEQMANHHNVSDDPASDGNCDDQGNIDSKMIDLNMRPVRTHGQG
                 ...* ::                       *:**    *: * :***** .* *.*  *

AT2G21320.1     SHNQEEGIDVNNANNH-----------EHE---
Os034540_Os09t0 SNSQTQGVDV-SVNNHDSPGVVPTCNFEREANK
                *:.* :*:** ..***           *:*
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
Os034540_Os09t0    M R T I C D V C E S A P A V L F C V A D E A A L C R S C D E K V H M C N K L A R R H V R V G L A D P N K V Q R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K P N H A D Q L G L R C Q K
Os034540_Os09t0    N A P A F F Y C E I D G T S L C L S C D M T V H V G G K R T H G R Y L L L R Q R V E F P G D K P G H M D D V A M Q - Q K
 
AT2G21320.1     A S S G R G Q E - - - - - - - - - - - - - - - - - - - - - - - S N G N - - - - G D H D H N M I D L N S N P Q R V H E P G
Os034540_Os09t0    D P E N R T D Q K K A P H S V T K E Q M A N H H N V S D D P A S D G N C D D Q G N I D S K M I D L N M R P V R T H G Q G
 
AT2G21320.1     S H N Q E E G I D V N N A N N H - - - - - - - - - - - E H E - - -
Os034540_Os09t0    S N S Q T Q G V D V - S V N N H D S P G V V P T C N F E R E A N K
 
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