fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006271 IDSKMIDLNMRPVRTHG in 166/211 AT4G38960.1 1st_not 0.618918918 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
Sb006271_Sorbi1 MRTICDVCESAPAVLFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPNKLARCDICE
                ** :**.****.*::********** ******* ********:*******.: . *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGL----
Sb006271_Sorbi1 NSPAFFYCEIDGTSLCLSCDMTVHVGGKRTHGRYLLLRQRVEFPGDKPGHMDDVPMETVP
                *:**********:****.***.********* *:******:*******.* *:: :    

AT2G21320.1     ---------RCQKASSGRGQESNGNGDH-------------DHNMIDLNSNPQRVHEPGS
Sb006271_Sorbi1 METKDPENQRDQKKAPKEQMANHHNGDHPACDGNCDDQGNIDSKMIDLNMRPVRTHGQGS
                         * ** :. .   .: ****             * :***** .* *.*  **

AT2G21320.1     HNQEEGIDVNNANNHEHE--------------
Sb006271_Sorbi1 NSQTQGVDL-SVNNHDSPGVVPTSNSERDASK
                :.* :*:*: ..***:
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
Sb006271_Sorbi1    M R T I C D V C E S A P A V L F C A A D E A A L C R S C D E K V H M C N K L A S R H V R V G L A D P N K L A R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K P N H A D Q L G L - - - -
Sb006271_Sorbi1    N S P A F F Y C E I D G T S L C L S C D M T V H V G G K R T H G R Y L L L R Q R V E F P G D K P G H M D D V P M E T V P
 
AT2G21320.1     - - - - - - - - - R C Q K A S S G R G Q E S N G N G D H - - - - - - - - - - - - - D H N M I D L N S N P Q R V H E P G S
Sb006271_Sorbi1    M E T K D P E N Q R D Q K K A P K E Q M A N H H N G D H P A C D G N C D D Q G N I D S K M I D L N M R P V R T H G Q G S
 
AT2G21320.1     H N Q E E G I D V N N A N N H E H E - - - - - - - - - - - - - -
Sb006271_Sorbi1    N S Q T Q G V D L - S V N N H D S P G V V P T S N S E R D A S K
 
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