fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030569 MDKKLIDLNTRPLRLNG in 166/212 AT4G38960.1 1st_not 0.624324324 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
gm030569_Glyma1 MRTLCDVCESAAAILFCAADEAALCSACDHKIHMCNKLASRHVRVGLADPTDVPRCDICE
                ** ***.*******:**********.:**.*:* ********:*******::.* *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK
gm030569_Glyma1 NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRAQFPGDKPAQMEELELQPMD
                *********************:********* *:****** :****** : ::* *:  .

AT2G21320.1     ASSGRGQES--------------------------NGNGDHDHNMIDLNSNPQRVHEPGS
gm030569_Glyma1 QNESRRDESQSLKLKTRDSQQNHSVSPFPRQENNIDGHGKMDKKLIDLNTRPLRLNGSAP
                 ...* :**                          :*:*. *:::****:.* *:: ...

AT2G21320.1     HNQEEGIDVNNANNHEHE--------------
gm030569_Glyma1 NNQEQCMDILRGNNHESASVPPVESFKQESEK
                :***: :*: ..****
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
gm030569_Glyma1    M R T L C D V C E S A A A I L F C A A D E A A L C S A C D H K I H M C N K L A S R H V R V G L A D P T D V P R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K P N H A D Q L G L R C Q K
gm030569_Glyma1    N A P A F F Y C E I D G S S L C L Q C D M I V H V G G K R T H G R Y L L L R Q R A Q F P G D K P A Q M E E L E L Q P M D
 
AT2G21320.1     A S S G R G Q E S - - - - - - - - - - - - - - - - - - - - - - - - - - N G N G D H D H N M I D L N S N P Q R V H E P G S
gm030569_Glyma1    Q N E S R R D E S Q S L K L K T R D S Q Q N H S V S P F P R Q E N N I D G H G K M D K K L I D L N T R P L R L N G S A P
 
AT2G21320.1     H N Q E E G I D V N N A N N H E H E - - - - - - - - - - - - - -
gm030569_Glyma1    N N Q E Q C M D I L R G N N H E S A S V P P V E S F K Q E S E K
 
0