fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21320.1 HDHNMIDLNSNPQRVHE at 139/172 in AT2G21320.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032644 MDKKLIDLNTRPLRLNG in 133/179 AT4G38960.1 not_not 0.624324324 III
Gm001706 MESKMIDLNMKPNRIHE in 166/184 AT4G38960.1 not_not 0.602702702 III
Gm030137 METKMIDLNMKPNRIHE in 166/193 AT4G38960.1 not_not 0.6 III
Gm030140 METKMIDLNMKPNRIHE in 166/189 AT4G38960.1 not_not 0.6 III
Gm030139 METKMIDLNMKPNRIHE in 166/184 AT4G38960.1 not_not 0.6 III
Gm030138 METKMIDLNMKPNRIHE in 166/184 AT4G38960.1 not_not 0.6 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G21320.1     MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE
gm001706_Glyma0 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICE
gm030140_Glyma1 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICE
gm030138_Glyma1 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICE
gm030139_Glyma1 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICE
gm032644_Glyma1 MRTLCDVCESAAAIVFCAADEAALCSACDHKIHMCNKLASRHVRVGLADPTDVPRCDICE
gm030137_Glyma1 MRTLCDACESAAAIVFCAADEAALCRACDEKVHMCNKLASRHVRVGLASPSDVPRCDICE
                ** ***.****************** :**.*:* ********:*****.*::.* *****

AT2G21320.1     NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQ-------
gm001706_Glyma0 NAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHAENPASQPLE
gm030140_Glyma1 NAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHAENPASQALE
gm030138_Glyma1 NAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHAENPASQALE
gm030139_Glyma1 NAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHAENPASQALE
gm032644_Glyma1 NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVQFPYSQQNHS---------
gm030137_Glyma1 NAPAFFYCETDGSSLCLQCDMIVHVGGKRTHGRYLLFRQRVEFPGDKSSHAENPASQALE
                ********* ***********:********* *:**:***::** .: .*:         

AT2G21320.1     --LGLRCQ----KASSGRGQESN-------------GNGDHDHNMIDLNSNPQRVHEPGS
gm001706_Glyma0 PGEAKRGQNPLPKLKMGEKQQNHKMPMVPTPGPDADGHAKMESKMIDLNMKPNRIHEQAS
gm030140_Glyma1 PGEAKRGQNPLPKLKMGEKQQNHRMPMVPTPGPDADGQTKMETKMIDLNMKPNRIHEQAS
gm030138_Glyma1 PGEAKRGQNPLPKLKMGEKQQNHRMPMVPTPGPDADGQTKMETKMIDLNMKPNRIHEQAS
gm030139_Glyma1 PGEAKRGQNPLPKLKMGEKQQNHRMPMVPTPGPDADGQTKMETKMIDLNMKPNRIHEQAS
gm032644_Glyma1 -------------VSPVPRQENNI-----------DGHGKMDKKLIDLNTRPLRLNGAAP
gm030137_Glyma1 PGEAKRGQNPLPKLKMGEKQQNHRMPMVPTPGPDADGQTKMETKMIDLNMKPNRIHEQAS
                              .    *:.:             *: . : ::**** .* *::  ..

AT2G21320.1     HNQEEGIDVNNANNH-------------EHE-
gm001706_Glyma0 NNQP----------------------------
gm030140_Glyma1 NNQVRVHGK-----------------------
gm030138_Glyma1 NNQP----------------------------
gm030139_Glyma1 NNQP----------------------------
gm032644_Glyma1 NNQERGMDILRGNNHKSASVPPVESFKQESEK
gm030137_Glyma1 NNQCSWMKV--------------EPFP-----
                :**
BoxShade v3.31 C (beta, 970507) Output
AT2G21320.1     M R I L C D A C E S A A A I V F C A A D E A A L C C S C D E K V H K C N K L A S R H L R V G L A D P S N A P S C D I C E
gm001706_Glyma0    M R T L C D A C E S A A A I V F C A A D E A A L C R A C D E K V H M C N K L A S R H V R V G L A S P S D V P R C D I C E
gm030140_Glyma1    M R T L C D A C E S A A A I V F C A A D E A A L C R A C D E K V H M C N K L A S R H V R V G L A S P S D V P R C D I C E
gm030138_Glyma1    M R T L C D A C E S A A A I V F C A A D E A A L C R A C D E K V H M C N K L A S R H V R V G L A S P S D V P R C D I C E
gm030139_Glyma1    M R T L C D A C E S A A A I V F C A A D E A A L C R A C D E K V H M C N K L A S R H V R V G L A S P S D V P R C D I C E
gm032644_Glyma1    M R T L C D V C E S A A A I V F C A A D E A A L C S A C D H K I H M C N K L A S R H V R V G L A D P T D V P R C D I C E
gm030137_Glyma1    M R T L C D A C E S A A A I V F C A A D E A A L C R A C D E K V H M C N K L A S R H V R V G L A S P S D V P R C D I C E
 
AT2G21320.1     N A P A F F Y C E I D G S S L C L Q C D M V V H V G G K R T H R R F L L L R Q R I E F P G D K P N H A D Q - - - - - - -
gm001706_Glyma0    N A P A F F Y C E T D G S S L C L Q C D M I V H V G G K R T H G R Y L L F R Q R V E F P G D K S S H A E N P A S Q P L E
gm030140_Glyma1    N A P A F F Y C E T D G S S L C L Q C D M I V H V G G K R T H G R Y L L F R Q R V E F P G D K S S H A E N P A S Q A L E
gm030138_Glyma1    N A P A F F Y C E T D G S S L C L Q C D M I V H V G G K R T H G R Y L L F R Q R V E F P G D K S S H A E N P A S Q A L E
gm030139_Glyma1    N A P A F F Y C E T D G S S L C L Q C D M I V H V G G K R T H G R Y L L F R Q R V E F P G D K S S H A E N P A S Q A L E
gm032644_Glyma1    N A P A F F Y C E I D G S S L C L Q C D M I V H V G G K R T H G R Y L L L R Q R V Q F P Y S Q Q N H S - - - - - - - - -
gm030137_Glyma1    N A P A F F Y C E T D G S S L C L Q C D M I V H V G G K R T H G R Y L L F R Q R V E F P G D K S S H A E N P A S Q A L E
 
AT2G21320.1     - - L G L R C Q - - - - K A S S G R G Q E S N - - - - - - - - - - - - - G N G D H D H N M I D L N S N P Q R V H E P G S
gm001706_Glyma0    P G E A K R G Q N P L P K L K M G E K Q Q N H K M P M V P T P G P D A D G H A K M E S K M I D L N M K P N R I H E Q A S
gm030140_Glyma1    P G E A K R G Q N P L P K L K M G E K Q Q N H R M P M V P T P G P D A D G Q T K M E T K M I D L N M K P N R I H E Q A S
gm030138_Glyma1    P G E A K R G Q N P L P K L K M G E K Q Q N H R M P M V P T P G P D A D G Q T K M E T K M I D L N M K P N R I H E Q A S
gm030139_Glyma1    P G E A K R G Q N P L P K L K M G E K Q Q N H R M P M V P T P G P D A D G Q T K M E T K M I D L N M K P N R I H E Q A S
gm032644_Glyma1    - - - - - - - - - - - - - V S P V P R Q E N N I - - - - - - - - - - - D G H G K M D K K L I D L N T R P L R L N G A A P
gm030137_Glyma1    P G E A K R G Q N P L P K L K M G E K Q Q N H R M P M V P T P G P D A D G Q T K M E T K M I D L N M K P N R I H E Q A S
 
AT2G21320.1     H N Q E E G I D V N N A N N H - - - - - - - - - - - - - E H E -
gm001706_Glyma0    N N Q P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm030140_Glyma1    N N Q V R V H G K - - - - - - - - - - - - - - - - - - - - - - -
gm030138_Glyma1    N N Q P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm030139_Glyma1    N N Q P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm032644_Glyma1    N N Q E R G M D I L R G N N H K S A S V P P V E S F K Q E S E K
gm030137_Glyma1    N N Q C S W M K V - - - - - - - - - - - - - - E P F P - - - - -
 
0