fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21530.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm053749 not found in 222aa AT2G21530.1 1st_1st 0.435323383 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G21530.1     MEITISQLCSRVKFSSSSSS---SSLFCFYGNSNRNNLNGAVSVNCL-RENEQISNISFI
gm053749_Glyma2 MESIFFQSLSLAKIPKSQTSPLLNSPLLFHSNAT------SVAFSSVPYHHHHLLKCFLF
                **  : *  * .*:..*.:*   .* : *:.*:.      :*:...:  .:.:: :  ::

AT2G21530.1     AKKPRSHAPVVRTTRASLDENQSPTSGGERWLLKPVGDGDTRHIGYKVAMPAPFEISSGQ
gm053749_Glyma2 RSKANEKQNLVGVLRASEAATTPTTNDAERWLLEPVGDGDTRHIGFKVEMPGPYEIASSE
                 .*...:  :* . ***   . ..*...*****:***********:** **.*:**:*.:

AT2G21530.1     VTIGRLPEKADVVIPVATVSGVHATINTNEKNLLVTDMNSTNGTFIEDKRLIPGVAAPAF
gm053749_Glyma2 VTVGRVPDKADLVIPVATVSGVHARIQKKQGNLLVTDLDSTNGTFINDKRLRPGVVATIS
                **:**:*:***:************ *:.:: ******::*******:**** ***.*.  

AT2G21530.1     PGTRITFGDTNLAIFRVFKLQD-------SEESIEKPT------TE--
gm053749_Glyma2 PGSCITFGDTHLAMFRVSKVEDVKPADTVGETEIELDTDNKSDDTETS
                **: ******:**:*** *::*       .* .**  *      **
BoxShade v3.31 C (beta, 970507) Output
AT2G21530.1     M E I T I S Q L C S R V K F S S S S S S - - - S S L F C F Y G N S N R N N L N G A V S V N C L - R E N E Q I S N I S F I
gm053749_Glyma2    M E S I F F Q S L S L A K I P K S Q T S P L L N S P L L F H S N A T - - - - - - S V A F S S V P Y H H H H L L K C F L F
 
AT2G21530.1     A K K P R S H A P V V R T T R A S L D E N Q S P T S G G E R W L L K P V G D G D T R H I G Y K V A M P A P F E I S S G Q
gm053749_Glyma2    R S K A N E K Q N L V G V L R A S E A A T T P T T N D A E R W L L E P V G D G D T R H I G F K V E M P G P Y E I A S S E
 
AT2G21530.1     V T I G R L P E K A D V V I P V A T V S G V H A T I N T N E K N L L V T D M N S T N G T F I E D K R L I P G V A A P A F
gm053749_Glyma2    V T V G R V P D K A D L V I P V A T V S G V H A R I Q K K Q G N L L V T D L D S T N G T F I N D K R L R P G V V A T I S
 
AT2G21530.1     P G T R I T F G D T N L A I F R V F K L Q D - - - - - - - S E E S I E K P T - - - - - - T E - -
gm053749_Glyma2    P G S C I T F G D T H L A M F R V S K V E D V K P A D T V G E T E I E L D T D N K S D D T E T S
 
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