fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G21650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os002918 not found in 85aa AT2G21650.1 1st_1st 0.537634408 Ia
Os022978 not found in 111aa AT1G75250.1 not_not 0.505376344 III
Os022977 not found in 90aa AT1G75250.2 not_not 0.5 III
Os002917 not found in 93aa AT2G21650.1 not_1st 0.451612903 II
Os009479 not found in 101aa AT1G19510.1 not_not 0.440860215 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G21650.1     MASGSMS-------------SYGSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAV-GG
Os009479_Os02t0 MSS----------------------SWTTKQNKVFERALAIYDRDTPDRWQNVARAVGGG
Os002918_Os01t0 MASMSVS-------------SSRAPQWTARQNEQFERALAVYDRDTPERWHNIARAV-AG
Os022978_Os05t0 MASAAGSKQQQAMMSLPSSRGGGGGGWTQRQNKQFECALAVYDKETPDRWHNIARYMGGA
Os022977_Os05t0 MA----Q-------------QARA-QWPQKQNKLFEQALAVYDKETPDRWHNIARAVGGG
Os002917_Os01t0 MASSSKA-------SSSSSASAASSEWTKQQNKQFERALAVYDTDAPDRWHNVARYMGGA
                *:                        *. :**: ** ***:** ::*:**:*:** : ..

AT2G21650.1     KTPEEAKRQYDLLVRDIESIENGHVPFPD-YKT----TTGNS----NRGRLRDEEKRMRS
Os009479_Os02t0 KSVDDVKRHYEKLIKDVDRIDSTGGHQGSHYNSSNASSSSSSSSSNSRGSA-NEDQRRRY
Os002918_Os01t0 KSADEVKLYYDLLVEDVKRIETGKVPFPA-YRCPQPAIAG--------------------
Os022978_Os05t0 KSADEVRRHFDHLVEDVSRIESGRVPFPR-YSS-SSSSRGA-----------DDGNRSRY
Os022977_Os05t0 KSAEDVKRYYEMLEEDIKHIESGKVPFPA-YRC--PAAAGY------------QAERLKH
Os002917_Os01t0 KSAEEVRRHYERLQADVEQIEAGGVPFSLGYGA-TPQA----------------GRR---
                *: ::.:  :: *  *:. *:         *                             

AT2G21650.1     MKLQ
Os009479_Os02t0 HNFQ
Os002918_Os01t0 ----
Os022978_Os05t0 LKYQ
Os022977_Os05t0 LKI-
Os002917_Os01t0 ----
BoxShade v3.31 C (beta, 970507) Output
AT2G21650.1     M A S G S M S - - - - - - - - - - - - - S Y G S G S W T V K Q N K A F E R A L A V Y D Q D T P D R W H N V A R A V - G G
Os009479_Os02t0    M S S - - - - - - - - - - - - - - - - - - - - - - S W T T K Q N K V F E R A L A I Y D R D T P D R W Q N V A R A V G G G
Os002918_Os01t0    M A S M S V S - - - - - - - - - - - - - S S R A P Q W T A R Q N E Q F E R A L A V Y D R D T P E R W H N I A R A V - A G
Os022978_Os05t0    M A S A A G S K Q Q Q A M M S L P S S R G G G G G G W T Q R Q N K Q F E C A L A V Y D K E T P D R W H N I A R Y M G G A
Os022977_Os05t0    M A - - - - Q - - - - - - - - - - - - - Q A R A - Q W P Q K Q N K L F E Q A L A V Y D K E T P D R W H N I A R A V G G G
Os002917_Os01t0    M A S S S K A - - - - - - - S S S S S A S A A S S E W T K Q Q N K Q F E R A L A V Y D T D A P D R W H N V A R Y M G G A
 
AT2G21650.1     K T P E E A K R Q Y D L L V R D I E S I E N G H V P F P D - Y K T - - - - T T G N S - - - - N R G R L R D E E K R M R S
Os009479_Os02t0    K S V D D V K R H Y E K L I K D V D R I D S T G G H Q G S H Y N S S N A S S S S S S S S S N S R G S A - N E D Q R R R Y
Os002918_Os01t0    K S A D E V K L Y Y D L L V E D V K R I E T G K V P F P A - Y R C P Q P A I A G - - - - - - - - - - - - - - - - - - - -
Os022978_Os05t0    K S A D E V R R H F D H L V E D V S R I E S G R V P F P R - Y S S - S S S S R G A - - - - - - - - - - - D D G N R S R Y
Os022977_Os05t0    K S A E D V K R Y Y E M L E E D I K H I E S G K V P F P A - Y R C - - P A A A G Y - - - - - - - - - - - - Q A E R L K H
Os002917_Os01t0    K S A E E V R R H Y E R L Q A D V E Q I E A G G V P F S L G Y G A - T P Q A - - - - - - - - - - - - - - - - G R R - - -
 
AT2G21650.1     M K L Q
Os009479_Os02t0    H N F Q
Os002918_Os01t0    - - - -
Os022978_Os05t0    L K Y Q
Os022977_Os05t0    L K I -
Os002917_Os01t0    - - - -
 
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