fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G22670.1 NFKATELRLGLPESQS at 52/321 in AT2G22670.1
NFKATELRLGLPESQS at 52/319 in AT2G22670.2
NFKATELRLGLPESQS at 52/321 in AT2G22670.3
NFKATELRLGLPESQS at 69/338 in AT2G22670.4
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011954 NLKETELRLGLPGYQS in 60/349 AT4G29080.1 not_not 0.468315301 III
Pt030401 NMKETELRLGLPGSQS in 66/335 AT4G29080.1 not_not 0.449768160 III
Pt005605 NLKATELRLGLPGSDS in 44/307 AT4G29080.1 not_not 0.431221020 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G22670.1     MSYRLLSVDKDELVTSPCLKERNYLGL-SDCSSVD------------SSTI---------
pt005605_POPTR_ -------------MSMP--LEHDYIGISSEVSSMENTSG---------------------
pt030401_POPTR_ ------------MYSIP--KEHDYIGL-SETPSMENISEKLSSSSTSSSTLSTEEKNNSS
pt011954_POPTR_ ------------MSSIP--KEHDYIGL-SETPSMEKISDKLSS---SSSTLSTEENIN--
                              : *   *::*:*: *: .*::                         

AT2G22670.1     -PNVVGKSN-----LNFKATELRLGLPESQSPERETDFGLLSPRTPDEKLLFPLLP----
pt005605_POPTR_ -TDTINISTTASKGLNLKATELRLGLPGSDSPERGNEN---------QQLGFSL------
pt030401_POPTR_ SSNSNNNNKNNNTSLNMKETELRLGLPGSQSPERKPTV---------PAAGVSLVGKDID
pt011954_POPTR_ -SNSNSNSNSTNTSLNLKETELRLGLPGYQSPERKLTL---------PAAGVSLFGKDID
                 .:  . ..     **:* ********  :****                 ..*      

AT2G22670.1     -SKDNGSATTGHKNVVSGNKRGFADT-------WDEFSGVKGSVRPGG---------GIN
pt005605_POPTR_ -NNNNSKD----KSFVSGARRGFSVAIHGGSANW-VFSGNAGSDPN-------FSLRGAN
pt030401_POPTR_ TNNTNAYSLIPVKNLVSGAKRVFSDAIDGSTGKW-VFSG------------------GDN
pt011954_POPTR_ TNNTNGYPLRPLKNLVSGTKRGFSDAIVGSSGKW-VFSGSNGSEVDLGKGAILFSPRGDN
                 .: *.      *..*** :* *: :       *  ***                  * *

AT2G22670.1     ------MMLSPKVK-DVSKS----IQEERSHAKGGLNN----APAAKAQVVGWPPIRSYR
pt005605_POPTR_ -----------SGKEGFPHSSKPVVQENKSQVDGANTNGHGAAPASKAQVVGWPPIRSFR
pt030401_POPTR_ GNPQKSRVAGPAKK-DVAQSPKP-VQEKNSQVAAANEN--SSAPAAKTQVVGWPPIRSFR
pt011954_POPTR_ GNSQKSCVAGPAKKDDVAQSPKP-VQEKISQVAAANEN--SSAPAAKAQVVGWPPIRSFR
                             * ...:*    :**: *:. ..  *    ***:*:**********:*

AT2G22670.1     KNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSC
pt005605_POPTR_ KNTMASHLSKNDDGAEVKSGSGCLYVKVSMDGAPYLRKVDLKTFGSYMELSSALEKMFSC
pt030401_POPTR_ KNTMASSLAKNNEDVDGKSGYGYLYVKVSMDGAPYLRKVDLKTYGNYLELSSALEKMFGC
pt011954_POPTR_ KNTMASSLVKNNEDVEGKSGYGCLYVKVSMDGAPYLRKVDLKTYSNYLELSSALEKMFSC
                ******   ** : .: *.* * *:****************:*: .* :*********.*

AT2G22670.1     FTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKL
pt005605_POPTR_ FTIGQCGSHVVPGQDGLSESRLMDLLHGSEYVLTYEDKDNDWMLVGDVPWKMFTDSCRRL
pt030401_POPTR_ FTIGQCGSHGLAARDGLTESCLKD-LHGSEYVLTFEDKDGDWMLVGDVPWDMFTDSCRRL
pt011954_POPTR_ FTIGQCGSHGLRGQDGLTESRLKDILHGSEYVLTYEDKDGDWMLVGDVPWDMFTNSCRRL
                **:**** *   .:: ::*  * * *****:***:****.**********.:**::*::*

AT2G22670.1     KIMKGSDSIGLAPGAVEKSKNKERV
pt005605_POPTR_ RIMKGSEAIGLAPRAMEKCKSRN--
pt030401_POPTR_ RIMKGSEAIGLAPRAMEKCKNRN--
pt011954_POPTR_ RIMKGSEAIGLAPRAMEKCKNRN--
                :*****::***** *:**.*.::
BoxShade v3.31 C (beta, 970507) Output
AT2G22670.1     M S Y R L L S V D K D E L V T S P C L K E R N Y L G L - S D C S S V D - - - - - - - - - - - - S S T I - - - - - - - - -
pt005605_POPTR_    - - - - - - - - - - - - - M S M P - - L E H D Y I G I S S E V S S M E N T S G - - - - - - - - - - - - - - - - - - - - -
pt030401_POPTR_    - - - - - - - - - - - - M Y S I P - - K E H D Y I G L - S E T P S M E N I S E K L S S S S T S S S T L S T E E K N N S S
pt011954_POPTR_    - - - - - - - - - - - - M S S I P - - K E H D Y I G L - S E T P S M E K I S D K L S S - - - S S S T L S T E E N I N - -
 
AT2G22670.1     - P N V V G K S N - - - - - L N F K A T E L R L G L P E S Q S P E R E T D F G L L S P R T P D E K L L F P L L P - - - -
pt005605_POPTR_    - T D T I N I S T T A S K G L N L K A T E L R L G L P G S D S P E R G N E N - - - - - - - - - Q Q L G F S L - - - - - -
pt030401_POPTR_    S S N S N N N N K N N N T S L N M K E T E L R L G L P G S Q S P E R K P T V - - - - - - - - - P A A G V S L V G K D I D
pt011954_POPTR_    - S N S N S N S N S T N T S L N L K E T E L R L G L P G Y Q S P E R K L T L - - - - - - - - - P A A G V S L F G K D I D
 
AT2G22670.1     - S K D N G S A T T G H K N V V S G N K R G F A D T - - - - - - - W D E F S G V K G S V R P G G - - - - - - - - - G I N
pt005605_POPTR_    - N N N N S K D - - - - K S F V S G A R R G F S V A I H G G S A N W - V F S G N A G S D P N - - - - - - - F S L R G A N
pt030401_POPTR_    T N N T N A Y S L I P V K N L V S G A K R V F S D A I D G S T G K W - V F S G - - - - - - - - - - - - - - - - - - G D N
pt011954_POPTR_    T N N T N G Y P L R P L K N L V S G T K R G F S D A I V G S S G K W - V F S G S N G S E V D L G K G A I L F S P R G D N
 
AT2G22670.1     - - - - - - M M L S P K V K - D V S K S - - - - I Q E E R S H A K G G L N N - - - - A P A A K A Q V V G W P P I R S Y R
pt005605_POPTR_    - - - - - - - - - - - S G K E G F P H S S K P V V Q E N K S Q V D G A N T N G H G A A P A S K A Q V V G W P P I R S F R
pt030401_POPTR_    G N P Q K S R V A G P A K K - D V A Q S P K P - V Q E K N S Q V A A A N E N - - S S A P A A K T Q V V G W P P I R S F R
pt011954_POPTR_    G N S Q K S C V A G P A K K D D V A Q S P K P - V Q E K I S Q V A A A N E N - - S S A P A A K A Q V V G W P P I R S F R
 
AT2G22670.1     K N T M A S S T S K N T D E V D G K P G L G V L F V K V S M D G A P Y L R K V D L R T Y T S Y Q Q L S S A L E K M F S C
pt005605_POPTR_    K N T M A S H L S K N D D G A E V K S G S G C L Y V K V S M D G A P Y L R K V D L K T F G S Y M E L S S A L E K M F S C
pt030401_POPTR_    K N T M A S S L A K N N E D V D G K S G Y G Y L Y V K V S M D G A P Y L R K V D L K T Y G N Y L E L S S A L E K M F G C
pt011954_POPTR_    K N T M A S S L V K N N E D V E G K S G Y G C L Y V K V S M D G A P Y L R K V D L K T Y S N Y L E L S S A L E K M F S C
 
AT2G22670.1     F T L G Q C G L H G A Q G R E R M S E I K L K D L L H G S E F V L T Y E D K D G D W M L V G D V P W E I F T E T C Q K L
pt005605_POPTR_    F T I G Q C G S H V V P G Q D G L S E S R L M D L L H G S E Y V L T Y E D K D N D W M L V G D V P W K M F T D S C R R L
pt030401_POPTR_    F T I G Q C G S H G L A A R D G L T E S C L K D - L H G S E Y V L T F E D K D G D W M L V G D V P W D M F T D S C R R L
pt011954_POPTR_    F T I G Q C G S H G L R G Q D G L T E S R L K D I L H G S E Y V L T Y E D K D G D W M L V G D V P W D M F T N S C R R L
 
AT2G22670.1     K I M K G S D S I G L A P G A V E K S K N K E R V
pt005605_POPTR_    R I M K G S E A I G L A P R A M E K C K S R N - -
pt030401_POPTR_    R I M K G S E A I G L A P R A M E K C K N R N - -
pt011954_POPTR_    R I M K G S E A I G L A P R A M E K C K N R N - -
 
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