|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Get sequence file Get alignment file Get formatted file made by BOXSHADE Sequence file prepared (0 sec required). Alignment has started. CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475) AT2G22800.1 ------------MG-----------------FDDTCNTGLVLGLGPSP------------ pt022588_POPTR_ MQNKREMELGLSLGDAATTSKPFGFMEKSTQLTNKVTSGFCMGLSIGT----NHTLQEED pt006139_POPTR_ ------MELALSLGD---TSKPFKFLDKTPKLSSK-DLGFCMGLGSGF----TAS-TRSH pt043918_POPTR_ ------MELALSLGD---TSKPFKFLDKTPKLSSK-DLGFCMGLGSGF----PAT-TRSQ pt031227_POPTR_ ------MELGLSLGDAATASKPFGFMEKSTKLTNKASLGFCMGLSIGQ----NHT-PRED pt011704_POPTR_ ----------MMMAE----------------KED---LGLSLSL---------------- pt000564_POPTR_ ------------MGC----------------LDDGCSTGLVLGLGLIPLTDLEST----- pt009723_POPTR_ ------------------------------------------------------------ pt032091_POPTR_ -----------MMAG----------------KED---LGLSLSL---------------- pt011705_POPTR_ ----------MMMAE----------------KED---LGLSLSL---------------- pt040388_POPTR_ -----------MMGFGT--------------TDDLCNTGLGLGLGSFHA-------EQEN pt037290_POPTR_ ------------MGC----------------LDDGCNTGLVLGLGFTT-TNLENT----- pt040049_POPTR_ ------------MGD----------------KNDG--LGLSLSLGY-------------- pt017318_POPTR_ ------------MGD----------------KNDG--LGLSLSLGFD------------- AT2G22800.1 ---------IPNNYNSTIRQSSV--------------YKLEPSLTLCL------------ pt022588_POPTR_ EDKDDHKLSNNIDHNSDNTNTRTATVQANKGTILTVDTSTDPPIQLDLLPNTPVPRNQNS pt006139_POPTR_ DKLGSH----ENNHQEDERRV-----------------SSDPPLQLVLLPFSPVPRRHQP pt043918_POPTR_ DKLGSH----ESNYQDDERRV-----------------SSDPPLQLDLLPFSPVPRGHQA pt031227_POPTR_ EDKEKH---GNNDHKSDNTNT-TTTAEANKRKGLTVDT-TDSPIQLDLLPNTPVPRNRNS pt011704_POPTR_ --------SVPQNQH---------------------------SLQFNLMPS-LVPSTAAS pt000564_POPTR_ --------SKPDDYSNRLIRPQIKPSLKFDHKPLT-STSFEPSLSL-------------- pt009723_POPTR_ ------------------------------------------------------------ pt032091_POPTR_ --------SVPQNQH---------------------------SLQLNLMPS-LVPSTASS pt011705_POPTR_ --------SVPQNQH---------------------------SLQFNLMPS-LVPSTAAS pt040388_POPTR_ CSQSDH-LFQPIKKDKLTLKYDL----------------LLPSLTLG--PSEEVYR---- pt037290_POPTR_ --------SRPADNNKRLIKPQIKPLM----------TGFEPSLSLGL------------ pt040049_POPTR_ --------ATQRNHHQ------------------------QPSLKLNLMP---LASQN-- pt017318_POPTR_ --------ATQQNHQQ------------------------QPSLKLNLMP---VPSQN-- AT2G22800.1 -----------------SGDPSV------T--------------VVTGADQLCR-----Q pt022588_POPTR_ IL---T----LASDNGTNFEAGS------SGNMSRGFDVNRFSAVMVHEDQADQDGATLS pt006139_POPTR_ PS---KTRFPWLTDNLVS-EPGS------TEGSGRGFDVNRLSM-----DDADE-GAALS pt043918_POPTR_ PS---RIRFPWLTDNLVS-EPGS------TEAPGRRFDVNRLSM-----DDADE-GAAIS pt031227_POPTR_ SP---TY---VVYDN---------------GNMSRGFDVNRFPAVMVHEDQADQDVAALS pt011704_POPTR_ SLSGFNPQKPSWNATFPPSDQNSDPYRAETRSFLRGIDVNRLPST-ADCEE------EAG pt000564_POPTR_ --------------------------------------------SIVAHDLLYR-----Q pt009723_POPTR_ ------------------------------------------------------------ pt032091_POPTR_ SLSGFHPQKPSWNVTFPSSDPNSNSYRAETRSLLRGIDVNRLPST-ADCEE------EAG pt011705_POPTR_ SLSGFNPQKPSWNATFPPSDQNSDPYRAETRSFLRGIDVNRLPST-ADCEE------EAG pt040388_POPTR_ --------------------------------------------SITKKTDADL---QPQ pt037290_POPTR_ -----------------SAETYS------LVDGKKGCE-----ESIGAHDQLYR-----Q pt040049_POPTR_ -----KHKKTSWTDLFQSPDRTCD-----TRLFQRGIDMNRVPAAVADCDD------ETG pt017318_POPTR_ -----NHRKTSLTDLFQSSDRACG-----TRFFQRGIDMNRVPAAVTDCDD------ETG AT2G22800.1 TSS-HSGVSSFSSGRVVKRERDGG---EESPEEEEMTERVISDYHED-EEGISARKKLRL pt022588_POPTR_ SSPPNSATSSFQMDFCIYSSKGGSGSNIEADQAERASSRA-SD--EE-ENGS-ARKKLRL pt006139_POPTR_ S--PNSAASSFQMDFGIRSGRGNK-RDLEAIEA----SRA-SD--DE-ENGL-TRKKLRL pt043918_POPTR_ S--PNSAASSFQMDFGIRSGRDRK-RDLDAIDAERASSRA-SD--DD-ENGL-TRKKLRL pt031227_POPTR_ SSPPNSATSSFQMDFCMYSSKGRSESHNEADQAERASSRA-SD--ED-ENGS-ARKKLRL pt011704_POPTR_ VSSPNSTISSI-SGK--RSEREGI--NGEEHEMERDYSRGISD-EED---GDTSRKKLRL pt000564_POPTR_ ASPDQSAVSSFSSGR-VKRERDLG---CEDIEVERISSRV-SD--ED-EDGTNARKKLRL pt009723_POPTR_ ----------------MKRERTKL-KQTEAIDAERASSRA-SD--DD-ENGL-TRKKLRL pt032091_POPTR_ VSSPNSTISSI-SGK--RSEREGI--NGDEHEMERASSHGISD-EED---GETSRKKLRL pt011705_POPTR_ VSSPNSTISSI-SGK--RSEREGI--NGEEHEMERDYSRGISD-EED---GDTSRKKLRL pt040388_POPTR_ ASS-LSAVSSFSNSS-IKKEREFG--IGEEVDVERISSRL-SD--ED-EEGS-PRKKLRL pt037290_POPTR_ ASP-HSAVSSFSSGR-VKRERDLS---SEDIEVERVSSRV-SD--ED-EDGSNARKKLRL pt040049_POPTR_ VSSPNSTLSSLISGK--RSEREQI---GEETEAERASCSRGSD-DED--GGDASRKKLRL pt017318_POPTR_ VSSPNSTLSSL-SGK--RSEREQI---GEETEAERASCSRDSD-DEDGAGGDASRKKLRL : : : ** :: * .****** AT2G22800.1 TKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFL pt022588_POPTR_ SKEQSSFLEESFKEHNTLTPKQKLALAKELNLRPRQVEVWFQNRRARTKLKQTEVDCEYL pt006139_POPTR_ SKDQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL pt043918_POPTR_ SKEQSAFLEESFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL pt031227_POPTR_ SKDQSAFLEESFKEHNTLTPKQKLALAKELNLRPRQVEVWFQNRRARTKLKQTEVDCEYL pt011704_POPTR_ SKDQAAILEESFKEHNTLNPKQKMALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFL pt000564_POPTR_ TKEQSALLEESFKQHSNLNPKQKEALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFL pt009723_POPTR_ SKGQSAFLEESFKEHNILNPKQMLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL pt032091_POPTR_ SKDQAAILEESFKEHNTLNPKQKMALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFL pt011705_POPTR_ SKDQAAILEESFKEHNTLNPKQKMALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFL pt040388_POPTR_ TKEQSVILEDNFKDHSTLNPKQKQVLAEQLNLRPRQVEVWFQNRRARSKLKQTEVDCELL pt037290_POPTR_ TKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEMDCEFL pt040049_POPTR_ SKEQSSVLEENFKEHNTLNPKEKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL pt017318_POPTR_ SKEQSLVLEETFKEHNTLNPKEKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL :* *: .**:.**:*. *.**: .**.:*.****************:******:*** * AT2G22800.1 KKCCETLADENIRLQKEIQELKTLKLTQPFYMHM-PASTLTKCPSCERIGGGGGGNGGGG pt022588_POPTR_ KRCCETLTEENRRLHKELQELRALKTSNPYYMQL-PATTLTMCPSCERVAAAATS----- pt006139_POPTR_ KRCCETLTKENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERASNSTRR----- pt043918_POPTR_ KRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERVATTTTS----- pt031227_POPTR_ KRCCETLTEENRRLHKELQELRALKTSNPFYMQL-PATTLTMCPSCERVATTSTST---A pt011704_POPTR_ KRCCENLTAENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPSA----- pt000564_POPTR_ KKCCEALTDENRRLQKELQELKALKLAQPFYMHM-PAATLTMCPSCERIGGGGDG----- pt009723_POPTR_ KRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERVATTTTS----- pt032091_POPTR_ KRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAAPPTA----- pt011705_POPTR_ KRCCENLTAENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPPSA----- pt040388_POPTR_ KKCCETLTLENKRLQKELQELKSLKLASPVYMQL-PAATLSMCPSCERICSGSDQG---- pt037290_POPTR_ KKCCETLTDENRRLQKELQDLKSLKMAQPFYMHM-PAATLTMCPSCERIGGVGEG----- pt040049_POPTR_ KTCCENLTEENRRLLKEVQELRALKLSPQLYMHMNPPTTLTMCPSCKRV-V-SSA----- pt017318_POPTR_ KRCCENLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPSCERVAV-SSA----- * *** *: ** ** **:*:*::** : **:: *.:**: ****:* AT2G22800.1 GGSGATAVIV-------------------DGSTAKGAFSISSKPHFF---NPFTNPSAAC pt022588_POPTR_ -ATATTA--------TTTTTNTQNNTTDPTSNTTGLSLS-SSRPRFYPFSHTQTHPHQPK pt006139_POPTR_ -SIT------------------------------------------F------------- pt043918_POPTR_ -SSGTTT--------TTTTTNPS--TTTTTSTTSSKPLSLPAKPRLFPLSHGQVQPHHAA pt031227_POPTR_ AATTTTATPTATAATTTTTTNNQNNTADPTSKTTGLSLG-STRPRFYPFSHTQTHPHQHT pt011704_POPTR_ -SSTVDARSHPHMG-PTP---PHHRPIPINPWAPAAPITRG--PTPFDVLRPRS------ pt000564_POPTR_ --------------------------------ASKSSFSMVPKPHFY---NTFTNPSAAC pt009723_POPTR_ -SSG-TT--------TTTTTNPSTTTTTTTSTTNSKPLSLPAKPRLFPLSHGQVQPHHAA pt032091_POPTR_ -SSTVDARPHPHIG-PT-----RHRPVPMNPWAPAAPVTRG--PTPFDAIRPRS------ pt011705_POPTR_ -SSTVDARSHPHMG-PTP---PHHRPIPINPWAPAAPITRG--PTPFDVLRPRS------ pt040388_POPTR_ --------------------------------SSTSTFTVGPKPNFY---NPDTHSSAAC pt037290_POPTR_ --------------------------------ASKSPFSMATKPHFY---NSFTNPSAAC pt040049_POPTR_ -SSSSAAVVSSALA-PIASTPQPQRPVPINPWA-AMPIHH----RTFDAPASSS------ pt017318_POPTR_ -SSSSAAAASSALA-PTASTRQPQRPVPINPWA-TMPVHQ----RTFDAPASRS------ : AT2G22800.1 - pt022588_POPTR_ A pt006139_POPTR_ - pt043918_POPTR_ S pt031227_POPTR_ A pt011704_POPTR_ - pt000564_POPTR_ - pt009723_POPTR_ S pt032091_POPTR_ - pt011705_POPTR_ - pt040388_POPTR_ - pt037290_POPTR_ - pt040049_POPTR_ - pt017318_POPTR_ -
|