fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23290.1 KDPMTCLRLSLPWVNE at 213/309 in AT2G23290.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037616 NDPPTSLSLSLPGADS in 213/330 AT4G37260.1 1st_not 0.540372670 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G23290.1     MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt037616_POPTR_ -MAITRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLS
                  . *****************: **.******.***************************

AT2G23290.1     PEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGG
pt037616_POPTR_ PQVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCS---SM
                *:**** **.:****** **************** ********************   . 

AT2G23290.1     GEEGQSCDFGGNGGYDGNL--TDEKPLKRRASGGGGVVVVTAL-----SPTGSDVSEQSQ
pt037616_POPTR_ AEDGNFCN---REGYDGNLDGDNTQPLKRSVSAGSGVPVSTGLYMSPGSPSGSDVSDSS-
                .*:*: *:   . ******   : :**** .*.*.** * *.*     **:*****:.* 

AT2G23290.1     SSGSVLPVSSSCH---VFKPTARAGGVV--IESSSPEEEEKDPMTCLRLSLPWVN-----
pt037616_POPTR_ -----LPGLSSSYNYNIYRPVARTGAVMPPVETTSSSDNNNDPPTSLSLSLPGADSSEVS
                     **  **.:   :::*.**:*.*:  :*::*..::::** *.* **** .:     

AT2G23290.1     ----------ESTTPPELFPVKREEEEEKEREISGLGG------DFMTVVQEMIKTEVRS
pt037616_POPTR_ NQVGEPSQLPKSNTVTPLLTGRNAPAQEVSPAVGGLSGSVGFNTEFMSVMQEMIRKEVRN
                          :*.* . *:. :.   :* .  :.**.*      :**:*:****:.***.

AT2G23290.1     YMADLQLGNGGGAGGGASSCMVQGTNGRNVGFREFIGLGRIE------
pt037616_POPTR_ YMME-----HSGVGGGMCYQGMSGEGFRNVAVNNRVGLVKLSSEKWTG
                ** :      .*.*** .   :.* . ***...: :** ::.
BoxShade v3.31 C (beta, 970507) Output
AT2G23290.1     M S G S T R K E M D R I K G P W S P E E D D L L Q S L V Q K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt037616_POPTR_    - M A I T R K E M D R I K G P W S P E E D E A L Q K L V Q K H G A R N W S L I S K S I P G R S G K S C R L R W C N Q L S
 
AT2G23290.1     P E V E H R G F T A E E D D T I I L A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S G G G G G
pt037616_POPTR_    P Q V E H R P F T P D E D D T I I R A H A R F G N K W A T I A R L L Y G R T D N A I K N H W N S T L K R K C S - - - S M
 
AT2G23290.1     G E E G Q S C D F G G N G G Y D G N L - - T D E K P L K R R A S G G G G V V V V T A L - - - - - S P T G S D V S E Q S Q
pt037616_POPTR_    A E D G N F C N - - - R E G Y D G N L D G D N T Q P L K R S V S A G S G V P V S T G L Y M S P G S P S G S D V S D S S -
 
AT2G23290.1     S S G S V L P V S S S C H - - - V F K P T A R A G G V V - - I E S S S P E E E E K D P M T C L R L S L P W V N - - - - -
pt037616_POPTR_    - - - - - L P G L S S S Y N Y N I Y R P V A R T G A V M P P V E T T S S S D N N N D P P T S L S L S L P G A D S S E V S
 
AT2G23290.1     - - - - - - - - - - E S T T P P E L F P V K R E E E E E K E R E I S G L G G - - - - - - D F M T V V Q E M I K T E V R S
pt037616_POPTR_    N Q V G E P S Q L P K S N T V T P L L T G R N A P A Q E V S P A V G G L S G S V G F N T E F M S V M Q E M I R K E V R N
 
AT2G23290.1     Y M A D L Q L G N G G G A G G G A S S C M V Q G T N G R N V G F R E F I G L G R I E - - - - - -
pt037616_POPTR_    Y M M E - - - - - H S G V G G G M C Y Q G M S G E G F R N V A V N N R V G L V K L S S E K W T G
 
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