fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23290.1 KDPMTCLRLSLPWVNE at 213/309 in AT2G23290.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000862 not found in 351aa AT4G37260.1 not_not 0.517598343 III
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_not 0.459627329 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G23290.1     MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt016180_POPTR_ -MASSRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt000862_POPTR_ -MATTRKEMDRIKGPWSPEEDEALKKLVQRHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
                  .::**::************: *: *** :*****************************

AT2G23290.1     PEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGG
pt016180_POPTR_ PEVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMFDD
pt000862_POPTR_ PQVEHRAFTPEEDDRIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMADD
                *:**** *:.**** ** ****:********************************.  ..

AT2G23290.1     GE----EGQSCDFGGNGGYDGNL--TDE--KPLKRRASGGGGVVVVTAL-----SPTGSD
pt016180_POPTR_ LN-----------------------DDAQQQPLKRSASLGAG----SGLHLNPSSPSGSD
pt000862_POPTR_ GNLSNLE----------GYDGNLDVDDT--QPSKRSVSAGSGVPLSTGLYMSPGSPSGSD
                 :                        *   :* ** .* *.*    :.*     **:***

AT2G23290.1     VSEQSQSSGSVLPVSSSC---HVFKPTARAGGVV-----IESSSPE-EEEKDPMTCLRLS
pt016180_POPTR_ LSDSS------IPGVNSS---PVFRPPVKTASLVPPSLSIDVSSPT----VDPPTSLSLS
pt000862_POPTR_ VSDSS------PPGLSSAHNHNIYRPVARTGGVLPP---VETASSSDNNDDDPPTLLSLS
                :*:.*       *  .*.    :::* .::..::     :: :*.      ** * * **

AT2G23290.1     LPWV------------------------NESTTPPELFPVKREEEE--------------
pt016180_POPTR_ LPGSITCQAPGSGSSSGSHVVNPTPMVQTPAAPPQAAVAVQQQEQV-------------S
pt000862_POPTR_ LPGA------DPATKLPNRVVEPTH--ERVAGSTQERVAGSTKERVAGSTQEPKPNTVTS
                **                            : ..   .. . :*.               

AT2G23290.1     -----------------EKEREISGLGG-----DFMTVVQEMIKTEVRSYMADLQLGNGG
pt016180_POPTR_ FL---------------QQKNPGSRLENQFFSAEFLAVMQEMIRKEVRNYMSGIE-----
pt000862_POPTR_ FLVAADPAQVTTPVVAGQTGRPGCGFVG--LSRELMTVMQEMIRREVRNYMMEQS-----
                                 :  .  . : .     ::::*:****: ***.**   .     

AT2G23290.1     GAGGGASSCMVQGTNGRNVGFREFIGLGRIE
pt016180_POPTR_ --QNGLC---LGTEAIRNAVVKR-IGISRIE
pt000862_POPTR_ --GGGMCYQGMSGEGFRNVAVNR-VGVGKIE
                   .* .   :     **. ... :*:.:**
BoxShade v3.31 C (beta, 970507) Output
AT2G23290.1     M S G S T R K E M D R I K G P W S P E E D D L L Q S L V Q K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt016180_POPTR_    - M A S S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt000862_POPTR_    - M A T T R K E M D R I K G P W S P E E D E A L K K L V Q R H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
 
AT2G23290.1     P E V E H R G F T A E E D D T I I L A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S G G G G G
pt016180_POPTR_    P E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M F D D
pt000862_POPTR_    P Q V E H R A F T P E E D D R I I R A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S S M A D D
 
AT2G23290.1     G E - - - - E G Q S C D F G G N G G Y D G N L - - T D E - - K P L K R R A S G G G G V V V V T A L - - - - - S P T G S D
pt016180_POPTR_    L N - - - - - - - - - - - - - - - - - - - - - - - D D A Q Q Q P L K R S A S L G A G - - - - S G L H L N P S S P S G S D
pt000862_POPTR_    G N L S N L E - - - - - - - - - - G Y D G N L D V D D T - - Q P S K R S V S A G S G V P L S T G L Y M S P G S P S G S D
 
AT2G23290.1     V S E Q S Q S S G S V L P V S S S C - - - H V F K P T A R A G G V V - - - - - I E S S S P E - E E E K D P M T C L R L S
pt016180_POPTR_    L S D S S - - - - - - I P G V N S S - - - P V F R P P V K T A S L V P P S L S I D V S S P T - - - - V D P P T S L S L S
pt000862_POPTR_    V S D S S - - - - - - P P G L S S A H N H N I Y R P V A R T G G V L P P - - - V E T A S S S D N N D D D P P T L L S L S
 
AT2G23290.1     L P W V - - - - - - - - - - - - - - - - - - - - - - - - N E S T T P P E L F P V K R E E E E - - - - - - - - - - - - - -
pt016180_POPTR_    L P G S I T C Q A P G S G S S S G S H V V N P T P M V Q T P A A P P Q A A V A V Q Q Q E Q V - - - - - - - - - - - - - S
pt000862_POPTR_    L P G A - - - - - - D P A T K L P N R V V E P T H - - E R V A G S T Q E R V A G S T K E R V A G S T Q E P K P N T V T S
 
AT2G23290.1     - - - - - - - - - - - - - - - - - E K E R E I S G L G G - - - - - D F M T V V Q E M I K T E V R S Y M A D L Q L G N G G
pt016180_POPTR_    F L - - - - - - - - - - - - - - - Q Q K N P G S R L E N Q F F S A E F L A V M Q E M I R K E V R N Y M S G I E - - - - -
pt000862_POPTR_    F L V A A D P A Q V T T P V V A G Q T G R P G C G F V G - - L S R E L M T V M Q E M I R R E V R N Y M M E Q S - - - - -
 
AT2G23290.1     G A G G G A S S C M V Q G T N G R N V G F R E F I G L G R I E
pt016180_POPTR_    - - Q N G L C - - - L G T E A I R N A V V K R - I G I S R I E
pt000862_POPTR_    - - G G G M C Y Q G M S G E G F R N V A V N R - V G V G K I E
 
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