fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23290.1 KDPMTCLRLSLPWVNE at 213/309 in AT2G23290.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt037616 NDPPTSLSLSLPGADS in 213/330 AT4G37260.1 1st_not 0.540372670 II
Pt000862 not found in 351aa AT4G37260.1 not_not 0.517598343 III
Pt016180 VDPPTSLSLSLPGSIT in 195/311 AT5G67300.1 not_not 0.459627329 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G23290.1     MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt000862_POPTR_ -MATTRKEMDRIKGPWSPEEDEALKKLVQRHGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt016180_POPTR_ -MASSRKDVDRIKGPWSPEEDEALQRLVQTYGPRNWSLISKSIPGRSGKSCRLRWCNQLS
pt037616_POPTR_ -MAITRKEMDRIKGPWSPEEDEALQKLVQKHGARNWSLISKSIPGRSGKSCRLRWCNQLS
                  . :**::************: *: *** :*.***************************

AT2G23290.1     PEVEHRGFTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGG
pt000862_POPTR_ PQVEHRAFTPEEDDRIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCS---SM
pt016180_POPTR_ PEVEHRPFSAEEDDTIIRAHARIGNKWATIARLLNGRTDNAIKNHWNSTLKRKCS---SM
pt037616_POPTR_ PQVEHRPFTPDEDDTIIRAHARFGNKWATIARLLYGRTDNAIKNHWNSTLKRKCS---SM
                *:**** *:.:*** ** ****:*********** ********************   . 

AT2G23290.1     GEEGQSCDFGGNGGYDGNL--TDEKPLKRRASGGGGVVVVTAL-----SPTGSDVSEQSQ
pt000862_POPTR_ ADDGNLSNL---EGYDGNLDVDDTQPSKRSVSAGSGVPLSTGLYMSPGSPSGSDVSDSS-
pt016180_POPTR_ FDDLN--------------DDAQQQPLKRSASLGAG----SGLHLNPSSPSGSDLSDSS-
pt037616_POPTR_ AEDGNFCNR---EGYDGNLDGDNTQPLKRSVSAGSGVPVSTGLYMSPGSPSGSDVSDSS-
                 :: :                 : :* ** .* *.*    :.*     **:***:*:.* 

AT2G23290.1     SSGSVLPVSSSC---HVFKPTARAGGVV--IESSSPEEEE-KDPMTCLRLSLPWVN----
pt000862_POPTR_ -----PPGLSSAHNHNIYRPVARTGGVLPPVETASSSDNNDDDPPTLLSLSLPGAD----
pt016180_POPTR_ -----IPGVNSS---PVFRPPVKTASLVPPSLSIDVSSPT-VDPPTSLSLSLPGSITCQA
pt037616_POPTR_ -----LPGLSSSYNYNIYRPVARTGAVMPPVETTSSSDNN-NDPPTSLSLSLPGAD----
                      *  .*.    :::* .::..::    : . ..    ** * * ****       

AT2G23290.1     ------------------ESTTPPELFPVKREEEEEK-----------------ERE---
pt000862_POPTR_ --PATKLPNRVVEPTH--ERVAGSTQERVAGSTKERVAGSTQEPKPNTVTSFLVAAD-PA
pt016180_POPTR_ PGSGSSSGSHVVNPTPMVQTPAAPPQAAVAVQQQEQV-------------SFLQQKN-PG
pt037616_POPTR_ ---SSEVSNQVGEP--------------------------SQLPKSNTVTPLLTGRNAPA
                                                                        :   

AT2G23290.1     -----------------ISGLGGDFMTVVQEMIKTEVRSYMADLQLGNGGGAGGGASSCM
pt000862_POPTR_ QVTTPVVAGQTGRPGCGFVGLSRELMTVMQEMIRREVRNYM--MEQS-----GGGMCYQG
pt016180_POPTR_ SRLEN-------------QFFSAEFLAVMQEMIRKEVRNYMSGIEQN-------GLC---
pt037616_POPTR_ QEVSPAVGGLSGS-----VGFNTEFMSVMQEMIRKEVRNYM--MEHSG---VGGGMCYQG
                                    :. ::::*:****: ***.**  :: .       * .   

AT2G23290.1     VQGTNGRNVGFREFIGLGRIE------
pt000862_POPTR_ MSGEGFRNVAV-NRVGVGKIE------
pt016180_POPTR_ LGTEAIRNAVV-KRIGISRIE------
pt037616_POPTR_ MSGEGFRNVAVNNRVGLVKLSSEKWTG
                :     **. . : :*: ::.
BoxShade v3.31 C (beta, 970507) Output
AT2G23290.1     M S G S T R K E M D R I K G P W S P E E D D L L Q S L V Q K H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt000862_POPTR_    - M A T T R K E M D R I K G P W S P E E D E A L K K L V Q R H G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt016180_POPTR_    - M A S S R K D V D R I K G P W S P E E D E A L Q R L V Q T Y G P R N W S L I S K S I P G R S G K S C R L R W C N Q L S
pt037616_POPTR_    - M A I T R K E M D R I K G P W S P E E D E A L Q K L V Q K H G A R N W S L I S K S I P G R S G K S C R L R W C N Q L S
 
AT2G23290.1     P E V E H R G F T A E E D D T I I L A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S G G G G G
pt000862_POPTR_    P Q V E H R A F T P E E D D R I I R A H A R F G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S - - - S M
pt016180_POPTR_    P E V E H R P F S A E E D D T I I R A H A R I G N K W A T I A R L L N G R T D N A I K N H W N S T L K R K C S - - - S M
pt037616_POPTR_    P Q V E H R P F T P D E D D T I I R A H A R F G N K W A T I A R L L Y G R T D N A I K N H W N S T L K R K C S - - - S M
 
AT2G23290.1     G E E G Q S C D F G G N G G Y D G N L - - T D E K P L K R R A S G G G G V V V V T A L - - - - - S P T G S D V S E Q S Q
pt000862_POPTR_    A D D G N L S N L - - - E G Y D G N L D V D D T Q P S K R S V S A G S G V P L S T G L Y M S P G S P S G S D V S D S S -
pt016180_POPTR_    F D D L N - - - - - - - - - - - - - - D D A Q Q Q P L K R S A S L G A G - - - - S G L H L N P S S P S G S D L S D S S -
pt037616_POPTR_    A E D G N F C N R - - - E G Y D G N L D G D N T Q P L K R S V S A G S G V P V S T G L Y M S P G S P S G S D V S D S S -
 
AT2G23290.1     S S G S V L P V S S S C - - - H V F K P T A R A G G V V - - I E S S S P E E E E - K D P M T C L R L S L P W V N - - - -
pt000862_POPTR_    - - - - - P P G L S S A H N H N I Y R P V A R T G G V L P P V E T A S S S D N N D D D P P T L L S L S L P G A D - - - -
pt016180_POPTR_    - - - - - I P G V N S S - - - P V F R P P V K T A S L V P P S L S I D V S S P T - V D P P T S L S L S L P G S I T C Q A
pt037616_POPTR_    - - - - - L P G L S S S Y N Y N I Y R P V A R T G A V M P P V E T T S S S D N N - N D P P T S L S L S L P G A D - - - -
 
AT2G23290.1     - - - - - - - - - - - - - - - - - - E S T T P P E L F P V K R E E E E E K - - - - - - - - - - - - - - - - - E R E - - -
pt000862_POPTR_    - - P A T K L P N R V V E P T H - - E R V A G S T Q E R V A G S T K E R V A G S T Q E P K P N T V T S F L V A A D - P A
pt016180_POPTR_    P G S G S S S G S H V V N P T P M V Q T P A A P P Q A A V A V Q Q Q E Q V - - - - - - - - - - - - - S F L Q Q K N - P G
pt037616_POPTR_    - - - S S E V S N Q V G E P - - - - - - - - - - - - - - - - - - - - - - - - - - S Q L P K S N T V T P L L T G R N A P A
 
AT2G23290.1     - - - - - - - - - - - - - - - - - I S G L G G D F M T V V Q E M I K T E V R S Y M A D L Q L G N G G G A G G G A S S C M
pt000862_POPTR_    Q V T T P V V A G Q T G R P G C G F V G L S R E L M T V M Q E M I R R E V R N Y M - - M E Q S - - - - - G G G M C Y Q G
pt016180_POPTR_    S R L E N - - - - - - - - - - - - - Q F F S A E F L A V M Q E M I R K E V R N Y M S G I E Q N - - - - - - - G L C - - -
pt037616_POPTR_    Q E V S P A V G G L S G S - - - - - V G F N T E F M S V M Q E M I R K E V R N Y M - - M E H S G - - - V G G G M C Y Q G
 
AT2G23290.1     V Q G T N G R N V G F R E F I G L G R I E - - - - - -
pt000862_POPTR_    M S G E G F R N V A V - N R V G V G K I E - - - - - -
pt016180_POPTR_    L G T E A I R N A V V - K R I G I S R I E - - - - - -
pt037616_POPTR_    M S G E G F R N V A V N N R V G L V K L S S E K W T G
 
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