fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23290.1 KDPMTCLRLSLPWVNE at 213/309 in AT2G23290.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023051 not found in 611aa AT4G37260.1 1st_not 0.447204968 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G23290.1     MSGSTRKEMDRIKGPWSPEEDDLLQSLVQKHG---------PRNWSLISKSIPGRSGKSC
Sb023051_Sorbi1 --GGRGPD----QGPLEP-----------RGGRGPAAAGGPPRRPQLVTHQ-PLHPGS--
                  *.   :    :** .*           : *         **. .*:::. * :.*.  

AT2G23290.1     RLRWCNQLSPEVEHRGFTAEEDDTIILAHARFGNKWATIARLL---------------NG
Sb023051_Sorbi1 -LR--QVVPPPVVQPAVAAGGAPPL---HARGGRHHPPRARKVRQQVGHHRAPPLRPHRQ
                 **  : :.* * : ..:*    .:   *** *.: .. ** :               . 

AT2G23290.1     RTDNAIKNHWNSTL-----------KRKCSG-----------------------------
Sb023051_Sorbi1 RHQEPLELHAQAQVLRRFRRRRRCGKRRCSGCRRRAPAQAHQQRRTPGALLQPRKPVRVR
                * ::.:: * :: :           **:***                             

AT2G23290.1     ----------------------------------------------GGGGGEEGQSCDFG
Sb023051_Sorbi1 PQRLQPPQPSLRHAVSRFCCRCRRHLPAAAAAARVPPRAARGRRGRAPGGAASCAAAAFS
                                                              . **. .  :. *.

AT2G23290.1     GN------GGYDGNLTDEKPLKRRA--------SGGGGVVVVTALSPTGSDVSEQSQSSG
Sb023051_Sorbi1 SSSSSAAAAAASGDLLVAVPLPARAGPAARTIPSDGTASTSCTDTSASGSSSSDAAAAAT
                ..      .. .*:*    **  **        *.* . .  *  *.:**. *: : :: 

AT2G23290.1     SVLPVSSSCHVFKPTARAGGVVIESSSPEEEEKDPMTCLRLSLPWVNESTTP---PELF-
Sb023051_Sorbi1 S--PTESEVAV--PAAAGAG-----DEPHVAAAGGSSAVQLGVPADDAGDDPDRGPELHV
                *  *..*.  *  *:* ..*     ..*.    .  :.::*.:*  : .  *   ***. 

AT2G23290.1     -----PVKREE-EEEKEREISGLGGDFMTVVQEMIKTEVRSYMADLQLGNGGGAGGGASS
Sb023051_Sorbi1 RVGLRPARRRRLRARRDQAHDGHGQD-------------RVVSAD-----------SSSR
                     *.:*.. . .:::  .* * *             *   **           .:* 

AT2G23290.1     CMVQGTNGRNV--GFREF-----------------IGLGRIE
Sb023051_Sorbi1 RPRSGRNRRSIRGGHRVYEPRTACTNQTEAVPCRAVRCGK--
                   .* * *.:  *.* :                 :  *:
BoxShade v3.31 C (beta, 970507) Output
AT2G23290.1     M S G S T R K E M D R I K G P W S P E E D D L L Q S L V Q K H G - - - - - - - - - P R N W S L I S K S I P G R S G K S C
Sb023051_Sorbi1    - - G G R G P D - - - - Q G P L E P - - - - - - - - - - - R G G R G P A A A G G P P R R P Q L V T H Q - P L H P G S - -
 
AT2G23290.1     R L R W C N Q L S P E V E H R G F T A E E D D T I I L A H A R F G N K W A T I A R L L - - - - - - - - - - - - - - - N G
Sb023051_Sorbi1    - L R - - Q V V P P P V V Q P A V A A G G A P P L - - - H A R G G R H H P P R A R K V R Q Q V G H H R A P P L R P H R Q
 
AT2G23290.1     R T D N A I K N H W N S T L - - - - - - - - - - - K R K C S G - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb023051_Sorbi1    R H Q E P L E L H A Q A Q V L R R F R R R R R C G K R R C S G C R R R A P A Q A H Q Q R R T P G A L L Q P R K P V R V R
 
AT2G23290.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G G G G E E G Q S C D F G
Sb023051_Sorbi1    P Q R L Q P P Q P S L R H A V S R F C C R C R R H L P A A A A A A R V P P R A A R G R R G R A P G G A A S C A A A A F S
 
AT2G23290.1     G N - - - - - - G G Y D G N L T D E K P L K R R A - - - - - - - - S G G G G V V V V T A L S P T G S D V S E Q S Q S S G
Sb023051_Sorbi1    S S S S S A A A A A A S G D L L V A V P L P A R A G P A A R T I P S D G T A S T S C T D T S A S G S S S S D A A A A A T
 
AT2G23290.1     S V L P V S S S C H V F K P T A R A G G V V I E S S S P E E E E K D P M T C L R L S L P W V N E S T T P - - - P E L F -
Sb023051_Sorbi1    S - - P T E S E V A V - - P A A A G A G - - - - - D E P H V A A A G G S S A V Q L G V P A D D A G D D P D R G P E L H V
 
AT2G23290.1     - - - - - P V K R E E - E E E K E R E I S G L G G D F M T V V Q E M I K T E V R S Y M A D L Q L G N G G G A G G G A S S
Sb023051_Sorbi1    R V G L R P A R R R R L R A R R D Q A H D G H G Q D - - - - - - - - - - - - - R V V S A D - - - - - - - - - - - S S S R
 
AT2G23290.1     C M V Q G T N G R N V - - G F R E F - - - - - - - - - - - - - - - - - I G L G R I E
Sb023051_Sorbi1    R P R S G R N R R S I R G G H R V Y E P R T A C T N Q T E A V P C R A V R C G K - -
 
0