fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019236 not found in 233aa AT2G23340.1 1st_1st 0.474320241 Ia
Sb033446 not found in 424aa AT2G23340.1 1st_1st 0.468277945 Ia
Gm047356 not found in 147aa AT2G23340.1 1st_1st 0.495468277 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G23340.1     -----------------------METE--------------------AAVTATVT-----
gm047356_Glyma1 -----------------------MEGE--------------------EG-----------
Os019236_Os04t0 -----------------------MQGEYHRSSSEDSAASAAAAAAAAAAAMAPLA-----
Sb033446_Sorbi1 PHDHHHHPRRSGNKLLLPNQPGGWRGTPLPSARRRSPRRLPRFRCRPRRCWAPVVERLRR
                                        .                                   

AT2G23340.1     ---AATMGIGTRKR--------------DLKPYKGIRMRKWGK---WV-----AEIREPN
gm047356_Glyma1 -------GIATKKRGK--------EGETETTRYKGIRMRKWGK---WV-----AEIREPN
Os019236_Os04t0 ---AAAAAVAAKEEQAAAAAVLPLQQQQPRRQYRGVRMRKWGK---WV-----AEIREPH
Sb033446_Sorbi1 RQGTAEAAAEVEEEEEEGGSIAAFGCASGASGWRRSASRTSGRGSGWVPTPPPSPPRAPT
                       .  ..:.                  ::    *. *:   **     :  * * 

AT2G23340.1     KRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLAGL-TVSNGGGR-------G
gm047356_Glyma1 KRSRIWLGSYSTPVAAARAYDTAVFHLRGPSARLNFPELVA-------AEGP-------A
Os019236_Os04t0 KRTRIWLGSYATPVAAARAYDTAVFYLRGRSARLNFPEEISSLASLSEGGGASEPREPDG
Sb033446_Sorbi1 TR------PCSTSAAAPRGSTSPT----SSTAR-RWPITPRATGTAARGRGSRPP-----
                .*      . :*. **.*.  :..    . :** .:*           . *         

AT2G23340.1     GDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENR-------GDYEKIENCRKSGN----
gm047356_Glyma1 ADMSAASIRKKATEVGARVDAL----------------------HRQHPHALPAGE----
Os019236_Os04t0 GTLSAASIRKKAIEVGSRVDALQTGMMVAPTTHHRERQKHHHHHHHHHPHLQPHGEEQHH
Sb033446_Sorbi1 ---PSARRRPRSAPASTRSTAALALASLAAVLPLRSRCRPTIAAAPRTPTSTGSPP----
                   .:*  * ::  ..::  *                         :             

AT2G23340.1     ------------GSLERVDLNKLPDP--------ENSDGD--DDECVKRR
gm047356_Glyma1 ------------FA-DRVDLNKMPEP--------ENSDCDYWDRD-----
Os019236_Os04t0 HHEQKHQRTAWSGRAKNPDLNQAPSP--------ENSDAE----------
Sb033446_Sorbi1 -------RTPQ-TTSDFVVVLLLPHPSTTLLVLRQNYSPKG---------
                               .   :   * *        :* . .
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     - - - - - - - - - - - - - - - - - - - - - - - M E T E - - - - - - - - - - - - - - - - - - - - A A V T A T V T - - - - -
gm047356_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - M E G E - - - - - - - - - - - - - - - - - - - - E G - - - - - - - - - - -
Os019236_Os04t0    - - - - - - - - - - - - - - - - - - - - - - - M Q G E Y H R S S S E D S A A S A A A A A A A A A A A M A P L A - - - - -
Sb033446_Sorbi1    P H D H H H H P R R S G N K L L L P N Q P G G W R G T P L P S A R R R S P R R L P R F R C R P R R C W A P V V E R L R R
 
AT2G23340.1     - - - A A T M G I G T R K R - - - - - - - - - - - - - - D L K P Y K G I R M R K W G K - - - W V - - - - - A E I R E P N
gm047356_Glyma1    - - - - - - - G I A T K K R G K - - - - - - - - E G E T E T T R Y K G I R M R K W G K - - - W V - - - - - A E I R E P N
Os019236_Os04t0    - - - A A A A A V A A K E E Q A A A A A V L P L Q Q Q Q P R R Q Y R G V R M R K W G K - - - W V - - - - - A E I R E P H
Sb033446_Sorbi1    R Q G T A E A A A E V E E E E E E G G S I A A F G C A S G A S G W R R S A S R T S G R G S G W V P T P P P S P P R A P T
 
AT2G23340.1     K R S R I W L G S Y A T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G L - T V S N G G G R - - - - - - - G
gm047356_Glyma1    K R S R I W L G S Y S T P V A A A R A Y D T A V F H L R G P S A R L N F P E L V A - - - - - - - A E G P - - - - - - - A
Os019236_Os04t0    K R T R I W L G S Y A T P V A A A R A Y D T A V F Y L R G R S A R L N F P E E I S S L A S L S E G G G A S E P R E P D G
Sb033446_Sorbi1    T R - - - - - - P C S T S A A A P R G S T S P T - - - - S S T A R - R W P I T P R A T G T A A R G R G S R P P - - - - -
 
AT2G23340.1     G D L S A A Y I R R K A A E V G A Q V D A L G A T V V V N T G G E N R - - - - - - - G D Y E K I E N C R K S G N - - - -
gm047356_Glyma1    A D M S A A S I R K K A T E V G A R V D A L - - - - - - - - - - - - - - - - - - - - - - H R Q H P H A L P A G E - - - -
Os019236_Os04t0    G T L S A A S I R K K A I E V G S R V D A L Q T G M M V A P T T H H R E R Q K H H H H H H H H H P H L Q P H G E E Q H H
Sb033446_Sorbi1    - - - P S A R R R P R S A P A S T R S T A A L A L A S L A A V L P L R S R C R P T I A A A P R T P T S T G S P P - - - -
 
AT2G23340.1     - - - - - - - - - - - - G S L E R V D L N K L P D P - - - - - - - - E N S D G D - - D D E C V K R R
gm047356_Glyma1    - - - - - - - - - - - - F A - D R V D L N K M P E P - - - - - - - - E N S D C D Y W D R D - - - - -
Os019236_Os04t0    H H E Q K H Q R T A W S G R A K N P D L N Q A P S P - - - - - - - - E N S D A E - - - - - - - - - -
Sb033446_Sorbi1    - - - - - - - R T P Q - T T S D F V V V L L L P H P S T T L L V L R Q N Y S P K G - - - - - - - - -
 
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