fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 1st_not 0.528700906 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G23340.1     METEAAVTATVTAATMGIGTRKR----DLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGS
pt001651_POPTR_ ME---------SGVDKEMATRKRGGMGSERQYKGIRMRKWGKWVAEIREPNKRSRIWLGS
                **         :..   :.****    . : *****************************

AT2G23340.1     YATPEAAARAYDTAVFYLRGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGA
pt001651_POPTR_ YSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFSCGGSY-GDMSAASIRKRATEVGA
                *:** ************************:*** ..* **.  **:*** **::*:****

AT2G23340.1     QVDALGATVVVNTGGENRGDYEKIENCRKSGNGSLER-----------VDLNKLPDPENS
pt001651_POPTR_ RVDAF-ETALNHHHHRHHDDRQRNSSNSTSSNDNNETVVDSRELKSRPVDLNKVPDPEDS
                :***:  *.: :   .::.* :: ..  .*.*.. *            *****:****:*

AT2G23340.1     DGDDDE-----------CVKRR
pt001651_POPTR_ DGDEWERSLATGGNPMGC----
                ***: *           *
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     M E T E A A V T A T V T A A T M G I G T R K R - - - - D L K P Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S
pt001651_POPTR_    M E - - - - - - - - - S G V D K E M A T R K R G G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I W L G S
 
AT2G23340.1     Y A T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G L T V S N G G G R G G D L S A A Y I R R K A A E V G A
pt001651_POPTR_    Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S C G G S Y - G D M S A A S I R K R A T E V G A
 
AT2G23340.1     Q V D A L G A T V V V N T G G E N R G D Y E K I E N C R K S G N G S L E R - - - - - - - - - - - V D L N K L P D P E N S
pt001651_POPTR_    R V D A F - E T A L N H H H H R H H D D R Q R N S S N S T S S N D N N E T V V D S R E L K S R P V D L N K V P D P E D S
 
AT2G23340.1     D G D D D E - - - - - - - - - - - C V K R R
pt001651_POPTR_    D G D E W E R S L A T G G N P M G C - - - -
 
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