fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036987 not found in 181aa AT5G67190.1 not_not 0.519637462 III
Pt016489 not found in 155aa AT1G46768.1 not_not 0.444108761 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.441087613 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G23340.1     METEAAVTATVTAA---TMGIGTRKRD-----LKPYKGIRMRKWGKWVAEIREPNKRSRI
pt038369_POPTR_ MEGECYTSPSASSSTPTISSIGKRKHGRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQNQEKPYRGIRMRKWGKWVAEIREPNKRSRI
pt036987_POPTR_ MESGV------------DKDMATRKRGGMES-ERQYKGIRMRKWGKWVAEIREPNKRSRI
                **                    .**:.      : *:***********************

AT2G23340.1     WLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAA
pt038369_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQE------DELCDVSAASIRKKAT
pt016489_POPTR_ WLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQE------DELRDVSAASIRKKAT
pt036987_POPTR_ WLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFG-GGGSCGDMSAASIRKRAT
                *****:** *****************.*****:::         .   *:*** **::*:

AT2G23340.1     EVGAQVDALGATVV--------VNTGGENRGDYEKIENCRKSGNGS----------LERV
pt038369_POPTR_ EVGAKVDALQTALH-------------------------ASPGDNSPA---NRLLLSEKP
pt016489_POPTR_ EVGAKVDALQTAVH-------------------------ASPEDNS------RVLLSEKP
pt036987_POPTR_ EVGAHVDAIETALNHHHHHHHHLHHDDRQRNS----NNSSSSNDNNETVVDSRELKPRPV
                ****:***: :::                           .. :..           .  

AT2G23340.1     DLNKLPDPENSDGDDDECVKRR
pt038369_POPTR_ DLNEYPENCDEE----------
pt016489_POPTR_ DLNKFPENSDEE----------
pt036987_POPTR_ DLNKVPDPEDSDGDE---WKRS
                ***: *:  :.:
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     M E T E A A V T A T V T A A - - - T M G I G T R K R D - - - - - L K P Y K G I R M R K W G K W V A E I R E P N K R S R I
pt038369_POPTR_    M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q N Q E K P Y R G I R M R K W G K W V A E I R E P N K R S R I
pt036987_POPTR_    M E S G V - - - - - - - - - - - - D K D M A T R K R G G M E S - E R Q Y K G I R M R K W G K W V A E I R E P N K R S R I
 
AT2G23340.1     W L G S Y A T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G L T V S N G G G R G G D L S A A Y I R R K A A
pt038369_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E - - - - - - D E L C D V S A A S I R K K A T
pt016489_POPTR_    W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E - - - - - - D E L R D V S A A S I R K K A T
pt036987_POPTR_    W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G - G G G S C G D M S A A S I R K R A T
 
AT2G23340.1     E V G A Q V D A L G A T V V - - - - - - - - V N T G G E N R G D Y E K I E N C R K S G N G S - - - - - - - - - - L E R V
pt038369_POPTR_    E V G A K V D A L Q T A L H - - - - - - - - - - - - - - - - - - - - - - - - - A S P G D N S P A - - - N R L L L S E K P
pt016489_POPTR_    E V G A K V D A L Q T A V H - - - - - - - - - - - - - - - - - - - - - - - - - A S P E D N S - - - - - - R V L L S E K P
pt036987_POPTR_    E V G A H V D A I E T A L N H H H H H H H H L H H D D R Q R N S - - - - N N S S S S N D N N E T V V D S R E L K P R P V
 
AT2G23340.1     D L N K L P D P E N S D G D D D E C V K R R
pt038369_POPTR_    D L N E Y P E N C D E E - - - - - - - - - -
pt016489_POPTR_    D L N K F P E N S D E E - - - - - - - - - -
pt036987_POPTR_    D L N K V P D P E D S D G D E - - - W K R S
 
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