fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt001651 not found in 187aa AT5G67190.1 1st_not 0.528700906 II
Pt036987 not found in 181aa AT5G67190.1 not_not 0.519637462 III
Pt016489 not found in 155aa AT1G46768.1 not_not 0.444108761 III
Pt038369 not found in 158aa AT1G46768.1 not_not 0.441087613 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G23340.1     ME-------TEAAVTATVTAATMGIGTRKR----DLKPYKGIRMRKWGKWVAEIREPNKR
pt001651_POPTR_ ME----------------SGVDKEMATRKRGGMGSERQYKGIRMRKWGKWVAEIREPNKR
pt036987_POPTR_ ME----------------SGVDKDMATRKRGGMESERQYKGIRMRKWGKWVAEIREPNKR
pt038369_POPTR_ MEGECYTSPSASSSTPTISSIGKRKHGRQQ---NQEKPYRGIRMRKWGKWVAEIREPNKR
pt016489_POPTR_ MEGGCCTSSTSTPSSTSTATTEKRKHSRQQ---NQEKPYRGIRMRKWGKWVAEIREPNKR
                **                :        *::    . : *:********************

AT2G23340.1     SRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLAGLTVSNGGGRGGDLSAAYIRR
pt001651_POPTR_ SRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEFLAGENFS-CGGSYGDMSAASIRK
pt036987_POPTR_ SRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPEVLAAEGFG-GGGSCGDMSAASIRK
pt038369_POPTR_ SRIWLGSYSTPIAAARAYDTAVFYLRGPSVRLNFPDLIHQED------ELCDVSAASIRK
pt016489_POPTR_ SRIWLGSYSTPIAAARAYDTAVFYLRGPSARLNFPDLIYQED------ELRDVSAASIRK
                ********:** *****************.*****:.:             *:*** **:

AT2G23340.1     KAAEVGAQVDALGATVVVNTGGE---NRGDYEKIENCRKSGNGSL-----------ERVD
pt001651_POPTR_ RATEVGARVDAFETALNHHHHR----HHDDRQRNSSNSTSSNDNNETVVDSRELKSRPVD
pt036987_POPTR_ RATEVGAHVDAIETALNHHHHHHHHLHHDDRQRNSNNSSSSNDNNETVVDSRELKPRPVD
pt038369_POPTR_ KATEVGAKVDALQTAL----------H-----------ASPGDNSPA---NRLLLSEKPD
pt016489_POPTR_ KATEVGAKVDALQTAV----------H-----------ASPEDNS------RVLLSEKPD
                :*:****:***: :::          :            *  ..            .  *

AT2G23340.1     LNKLPDPENSDGDDDECVKRR----------
pt001651_POPTR_ LNKVPDPEDSDGDE---WERSLATGGNPMGC
pt036987_POPTR_ LNKVPDPEDSDGDE---WKRS----------
pt038369_POPTR_ LNEYPENCDEE--------------------
pt016489_POPTR_ LNKFPENSDEE--------------------
                **: *:  :.:
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     M E - - - - - - - T E A A V T A T V T A A T M G I G T R K R - - - - D L K P Y K G I R M R K W G K W V A E I R E P N K R
pt001651_POPTR_    M E - - - - - - - - - - - - - - - - S G V D K E M A T R K R G G M G S E R Q Y K G I R M R K W G K W V A E I R E P N K R
pt036987_POPTR_    M E - - - - - - - - - - - - - - - - S G V D K D M A T R K R G G M E S E R Q Y K G I R M R K W G K W V A E I R E P N K R
pt038369_POPTR_    M E G E C Y T S P S A S S S T P T I S S I G K R K H G R Q Q - - - N Q E K P Y R G I R M R K W G K W V A E I R E P N K R
pt016489_POPTR_    M E G G C C T S S T S T P S S T S T A T T E K R K H S R Q Q - - - N Q E K P Y R G I R M R K W G K W V A E I R E P N K R
 
AT2G23340.1     S R I W L G S Y A T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A G L T V S N G G G R G G D L S A A Y I R R
pt001651_POPTR_    S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E F L A G E N F S - C G G S Y G D M S A A S I R K
pt036987_POPTR_    S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E V L A A E G F G - G G G S C G D M S A A S I R K
pt038369_POPTR_    S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S V R L N F P D L I H Q E D - - - - - - E L C D V S A A S I R K
pt016489_POPTR_    S R I W L G S Y S T P I A A A R A Y D T A V F Y L R G P S A R L N F P D L I Y Q E D - - - - - - E L R D V S A A S I R K
 
AT2G23340.1     K A A E V G A Q V D A L G A T V V V N T G G E - - - N R G D Y E K I E N C R K S G N G S L - - - - - - - - - - - E R V D
pt001651_POPTR_    R A T E V G A R V D A F E T A L N H H H H R - - - - H H D D R Q R N S S N S T S S N D N N E T V V D S R E L K S R P V D
pt036987_POPTR_    R A T E V G A H V D A I E T A L N H H H H H H H H L H H D D R Q R N S N N S S S S N D N N E T V V D S R E L K P R P V D
pt038369_POPTR_    K A T E V G A K V D A L Q T A L - - - - - - - - - - H - - - - - - - - - - - A S P G D N S P A - - - N R L L L S E K P D
pt016489_POPTR_    K A T E V G A K V D A L Q T A V - - - - - - - - - - H - - - - - - - - - - - A S P E D N S - - - - - - R V L L S E K P D
 
AT2G23340.1     L N K L P D P E N S D G D D D E C V K R R - - - - - - - - - -
pt001651_POPTR_    L N K V P D P E D S D G D E - - - W E R S L A T G G N P M G C
pt036987_POPTR_    L N K V P D P E D S D G D E - - - W K R S - - - - - - - - - -
pt038369_POPTR_    L N E Y P E N C D E E - - - - - - - - - - - - - - - - - - - -
pt016489_POPTR_    L N K F P E N S D E E - - - - - - - - - - - - - - - - - - - -
 
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