fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030094 not found in 461aa AT2G23340.1 not_1st 0.441087613 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G23340.1     -------METEAAVTAT------------------------VTAATMGIGTRKRDLKPYK
Sb030094_Sorbi1 RDGREGSQENHANAKSSCRYHCCCCCCTCLHNPQPPSAGPQVRASEREREKRQRLQQPAK
                        *..* ..::                        * *:     .*:*  :* *

AT2G23340.1     -------------GIRMRKWGKWVAEIREPNKRSRIW-----------------------
Sb030094_Sorbi1 AGAHAGRVPVFQRGVGGRGRGS------SSSSRSRCHGSSCGRRSRRGEDGGGAGCDGGG
                             *:  *  *.      ....***                         

AT2G23340.1     --------LGSYATPEA------------------------AARAYDTAVFYL---RGPS
Sb030094_Sorbi1 RCGGAAAGVGAPAPPAADAAASAVPRRAHAEVGQVGGGDPGAAQAHAHLAGVLRHGRGGG
                        :*: *.* *                        **:*:   .  *   ** .

AT2G23340.1     ARLNFPELLAG-------------LTVSNGG---GRGGDLSAAYIRRK------------
Sb030094_Sorbi1 ARLRHGRVLPSRPVGAAQLPRRDPLAVAVGGRARGRGDRPRRRWWRRRHAVRGVHPEEGH
                ***.. .:*..             *:*: **   ***.     : **:            

AT2G23340.1     ------------------------------------------------AAEVGAQVDALG
Sb030094_Sorbi1 RGGVPRGRAPDRHDGAPAAPPRAPEAPPPPPPPPPPAAAACPRARGGGAPPAGAEAVAAA
                                                                *. .**:. * .

AT2G23340.1     ATVV-------VNTGGENRGDYEKIENCRKSGNGSL---------------ERVDLNKLP
Sb030094_Sorbi1 ASVERARQEPGSKPGAEPRELRRRVTSERASDTARLNVNDDVRYRLFPFPRRRPALQHMP
                *:*         :.*.* *   .:: . * *... *               .*  *:::*

AT2G23340.1     --DPENSDGDDDECVKRR
Sb030094_Sorbi1 LSSPSPRTYDDPS-----
                  .*.    ** .
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     - - - - - - - M E T E A A V T A T - - - - - - - - - - - - - - - - - - - - - - - - V T A A T M G I G T R K R D L K P Y K
Sb030094_Sorbi1    R D G R E G S Q E N H A N A K S S C R Y H C C C C C C T C L H N P Q P P S A G P Q V R A S E R E R E K R Q R L Q Q P A K
 
AT2G23340.1     - - - - - - - - - - - - - G I R M R K W G K W V A E I R E P N K R S R I W - - - - - - - - - - - - - - - - - - - - - - -
Sb030094_Sorbi1    A G A H A G R V P V F Q R G V G G R G R G S - - - - - - S S S S R S R C H G S S C G R R S R R G E D G G G A G C D G G G
 
AT2G23340.1     - - - - - - - - L G S Y A T P E A - - - - - - - - - - - - - - - - - - - - - - - - A A R A Y D T A V F Y L - - - R G P S
Sb030094_Sorbi1    R C G G A A A G V G A P A P P A A D A A A S A V P R R A H A E V G Q V G G G D P G A A Q A H A H L A G V L R H G R G G G
 
AT2G23340.1     A R L N F P E L L A G - - - - - - - - - - - - - L T V S N G G - - - G R G G D L S A A Y I R R K - - - - - - - - - - - -
Sb030094_Sorbi1    A R L R H G R V L P S R P V G A A Q L P R R D P L A V A V G G R A R G R G D R P R R R W W R R R H A V R G V H P E E G H
 
AT2G23340.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A A E V G A Q V D A L G
Sb030094_Sorbi1    R G G V P R G R A P D R H D G A P A A P P R A P E A P P P P P P P P P P A A A A C P R A R G G G A P P A G A E A V A A A
 
AT2G23340.1     A T V V - - - - - - - V N T G G E N R G D Y E K I E N C R K S G N G S L - - - - - - - - - - - - - - - E R V D L N K L P
Sb030094_Sorbi1    A S V E R A R Q E P G S K P G A E P R E L R R R V T S E R A S D T A R L N V N D D V R Y R L F P F P R R R P A L Q H M P
 
AT2G23340.1     - - D P E N S D G D D D E C V K R R
Sb030094_Sorbi1    L S S P S P R T Y D D P S - - - - -
 
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