fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033446 not found in 424aa AT2G23340.1 1st_1st 0.468277945 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G23340.1     ------------------------------------------------------------
Sb033446_Sorbi1 PHDHHHHPRRSGNKLLLPNQPGGWRGTPLPSARRRSPRRLPRFRCRPRRCWAPVVERLRR
                                                                            

AT2G23340.1     -------------METEAAVTATVTAATMGIGTRKRDLKPYKGIRMRKWGK---WV----
Sb033446_Sorbi1 RQGTAEAAAEVEEEEEEGGSIAAFGCASGASGWRRS--------ASRTSGRGSGWVPTPP
                              * *..  *:. .*: . * *:           *. *:   **    

AT2G23340.1     -AEIREPNKR-------------------SRIWLGSYATPEA---AARAYDTAVFYLRG-
Sb033446_Sorbi1 PSPPRAPTTRPCSTSAAAPRGSTSPTSSTARRWP---ITPRATGTAARG--------RGS
                 :  * *..*                   :* *     **.*   ***.        ** 

AT2G23340.1     ---PSARLNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGEN
Sb033446_Sorbi1 RPPPSAR-----------------RRPRSAPASTRSTAALALA---SLAAVLPLRS----
                   ****                 *    :.*  * .** . *   :*.*.: :.:    

AT2G23340.1     RGDYEKIENCR---------KSGNGSLERVDLNK--------LPDPENSDGDDDECVKRR
Sb033446_Sorbi1 --------RCRPTIAAAPRTPTSTGSPPRTPQTTSDFVVVLLLPHPSTT-----LLVLRQ
                        .**          :..**  *.  ..        **.*..:       * *:

AT2G23340.1     ------
Sb033446_Sorbi1 NYSPKG
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb033446_Sorbi1    P H D H H H H P R R S G N K L L L P N Q P G G W R G T P L P S A R R R S P R R L P R F R C R P R R C W A P V V E R L R R
 
AT2G23340.1     - - - - - - - - - - - - - M E T E A A V T A T V T A A T M G I G T R K R D L K P Y K G I R M R K W G K - - - W V - - - -
Sb033446_Sorbi1    R Q G T A E A A A E V E E E E E E G G S I A A F G C A S G A S G W R R S - - - - - - - - A S R T S G R G S G W V P T P P
 
AT2G23340.1     - A E I R E P N K R - - - - - - - - - - - - - - - - - - - S R I W L G S Y A T P E A - - - A A R A Y D T A V F Y L R G -
Sb033446_Sorbi1    P S P P R A P T T R P C S T S A A A P R G S T S P T S S T A R R W P - - - I T P R A T G T A A R G - - - - - - - - R G S
 
AT2G23340.1     - - - P S A R L N F P E L L A G L T V S N G G G R G G D L S A A Y I R R K A A E V G A Q V D A L G A T V V V N T G G E N
Sb033446_Sorbi1    R P P P S A R - - - - - - - - - - - - - - - - - R R P R S A P A S T R S T A A L A L A - - - S L A A V L P L R S - - - -
 
AT2G23340.1     R G D Y E K I E N C R - - - - - - - - - K S G N G S L E R V D L N K - - - - - - - - L P D P E N S D G D D D E C V K R R
Sb033446_Sorbi1    - - - - - - - - R C R P T I A A A P R T P T S T G S P P R T P Q T T S D F V V V L L L P H P S T T - - - - - L L V L R Q
 
AT2G23340.1     - - - - - -
Sb033446_Sorbi1    N Y S P K G
 
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