fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G23340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001918 not found in 168aa AT4G36900.1 not_not 0.495468277 III
Gm011914 not found in 150aa AT5G67190.1 not_not 0.483383685 III
Gm039398 not found in 174aa AT1G46768.1 not_not 0.453172205 III
Gm008859 not found in 160aa AT1G46768.1 not_not 0.453172205 III
Gm047992 not found in 174aa AT4G36900.1 not_not 0.450151057 III
Gm014043 not found in 159aa AT5G67190.1 not_not 0.450151057 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G23340.1     METEAAVTATVTAATMGIGTRKRD----------------------LKPYKGIRMRKWGK
gm039398_Glyma1 MEDR--DHCCSNNSTMITTTKKRT--GRRSPTSDKLKNQHR-EKQSMKPYRGIRMRKWGK
gm047992_Glyma1 MEER--DHRCSNNSTMITTTKKKT--SRRSPTSDKLKNQHPCEKQAMKPYRGIRMRKWGK
gm011914_Glyma0 MEGEGG-----------SATRKRGKDGETETTT---------------RYKGIRMRKWGK
gm014043_Glyma0 MEEAGLGDCCSSNTTI---TRK----------SEKRKQQHQ---QQEKPYRGIRMRKWGK
gm001918_Glyma0 MESEG---------------RREG--GERETTAATRKVE-----GAERRYKGIRMRKWGK
gm008859_Glyma0 MEEAGLGDCCSSNSTI---TRK----------SDKRKQQHQ---QQEKPYRGIRMRKWGK
                **                  ::                           *:*********

AT2G23340.1     WVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSARLNFPELLA------GL-T
gm039398_Glyma1 WVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPTARLNFPELLFQDDDQEGSDS
gm047992_Glyma1 WVAEIREPNKRSRIWLGSYTTPMAAARAYDTAVFYLRGPTARLNFPELLFQDDQEEGNDS
gm011914_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLAAEGPA----A
gm014043_Glyma0 WVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDDV----S
gm001918_Glyma0 WVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPELLVREGPA----A
gm008859_Glyma0 WVAEIREPNKRSRIWLGSYATPVAAARAYDTAVFHLRGPSARLNFPELLSQDDDV----S
                *******************:** ***********:****:*********          :

AT2G23340.1     VSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVN---------TGGENRGDYEKIEN
gm039398_Glyma1 VQHG--AAGNMSADSIRRKATQVGARVDALQTALHHH-AP--------STNSLNL-----
gm047992_Glyma1 VQHGA-AAGNMSADSIRRKATQVGARVDALQTALHHH-AS--------STNS--L-----
gm011914_Glyma0 --SD----AVMSAASIRKKATEVGARVDALHRQDPH--APP----------AGEF-----
gm014043_Glyma0 TQQQ----GKMSADSIRKKATQVGARVDALQTALQQS-SST------HSISSSHV-----
gm001918_Glyma0 LVAG----CDMSAASIRKKATEVGARVDALQATLHHHYVPPRQLLSGGGGGSGDF-----
gm008859_Glyma0 TQQQ----GNMSADSIRKKATQVGARVDALQTALQQS-SSS------HSANSSHVS----
                          :**  **:**::***:****                              

AT2G23340.1     CRKSGNGSLER-VDLNKLPDPEN-SDGD----DDECVKRR
gm039398_Glyma1 ----------K-PDLNEFPKLEELQD--------------
gm047992_Glyma1 ----------K-PDLNEFPKLESLQD--------------
gm011914_Glyma0 --------ADR-VDLNKIPEPEN-SDCDYWGGD-------
gm014043_Glyma0 -------SYEK-PDLNEYPKPED-----------------
gm001918_Glyma0 --------PVRVVDLNKMPEPES-SDCE-WDVN-------
gm008859_Glyma0 -------SSDK-PDLNEYPKPED-----------------
                          :  ***: *. *.
BoxShade v3.31 C (beta, 970507) Output
AT2G23340.1     M E T E A A V T A T V T A A T M G I G T R K R D - - - - - - - - - - - - - - - - - - - - - - L K P Y K G I R M R K W G K
gm039398_Glyma1    M E D R - - D H C C S N N S T M I T T T K K R T - - G R R S P T S D K L K N Q H R - E K Q S M K P Y R G I R M R K W G K
gm047992_Glyma1    M E E R - - D H R C S N N S T M I T T T K K K T - - S R R S P T S D K L K N Q H P C E K Q A M K P Y R G I R M R K W G K
gm011914_Glyma0    M E G E G G - - - - - - - - - - - S A T R K R G K D G E T E T T T - - - - - - - - - - - - - - - R Y K G I R M R K W G K
gm014043_Glyma0    M E E A G L G D C C S S N T T I - - - T R K - - - - - - - - - - S E K R K Q Q H Q - - - Q Q E K P Y R G I R M R K W G K
gm001918_Glyma0    M E S E G - - - - - - - - - - - - - - - R R E G - - G E R E T T A A T R K V E - - - - - G A E R R Y K G I R M R K W G K
gm008859_Glyma0    M E E A G L G D C C S S N S T I - - - T R K - - - - - - - - - - S D K R K Q Q H Q - - - Q Q E K P Y R G I R M R K W G K
 
AT2G23340.1     W V A E I R E P N K R S R I W L G S Y A T P E A A A R A Y D T A V F Y L R G P S A R L N F P E L L A - - - - - - G L - T
gm039398_Glyma1    W V A E I R E P N K R S R I W L G S Y T T P V A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D D Q E G S D S
gm047992_Glyma1    W V A E I R E P N K R S R I W L G S Y T T P M A A A R A Y D T A V F Y L R G P T A R L N F P E L L F Q D D Q E E G N D S
gm011914_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L A A E G P A - - - - A
gm014043_Glyma0    W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D V - - - - S
gm001918_Glyma0    W V A E I R E P N K R S R I W L G S Y S T P V A A A R A Y D T A V F Y L R G P S A R L N F P E L L V R E G P A - - - - A
gm008859_Glyma0    W V A E I R E P N K R S R I W L G S Y A T P V A A A R A Y D T A V F H L R G P S A R L N F P E L L S Q D D D V - - - - S
 
AT2G23340.1     V S N G G G R G G D L S A A Y I R R K A A E V G A Q V D A L G A T V V V N - - - - - - - - - T G G E N R G D Y E K I E N
gm039398_Glyma1    V Q H G - - A A G N M S A D S I R R K A T Q V G A R V D A L Q T A L H H H - A P - - - - - - - - S T N S L N L - - - - -
gm047992_Glyma1    V Q H G A - A A G N M S A D S I R R K A T Q V G A R V D A L Q T A L H H H - A S - - - - - - - - S T N S - - L - - - - -
gm011914_Glyma0    - - S D - - - - A V M S A A S I R K K A T E V G A R V D A L H R Q D P H - - A P P - - - - - - - - - - A G E F - - - - -
gm014043_Glyma0    T Q Q Q - - - - G K M S A D S I R K K A T Q V G A R V D A L Q T A L Q Q S - S S T - - - - - - H S I S S S H V - - - - -
gm001918_Glyma0    L V A G - - - - C D M S A A S I R K K A T E V G A R V D A L Q A T L H H H Y V P P R Q L L S G G G G G S G D F - - - - -
gm008859_Glyma0    T Q Q Q - - - - G N M S A D S I R K K A T Q V G A R V D A L Q T A L Q Q S - S S S - - - - - - H S A N S S H V S - - - -
 
AT2G23340.1     C R K S G N G S L E R - V D L N K L P D P E N - S D G D - - - - D D E C V K R R
gm039398_Glyma1    - - - - - - - - - - K - P D L N E F P K L E E L Q D - - - - - - - - - - - - - -
gm047992_Glyma1    - - - - - - - - - - K - P D L N E F P K L E S L Q D - - - - - - - - - - - - - -
gm011914_Glyma0    - - - - - - - - A D R - V D L N K I P E P E N - S D C D Y W G G D - - - - - - -
gm014043_Glyma0    - - - - - - - S Y E K - P D L N E Y P K P E D - - - - - - - - - - - - - - - - -
gm001918_Glyma0    - - - - - - - - P V R V V D L N K M P E P E S - S D C E - W D V N - - - - - - -
gm008859_Glyma0    - - - - - - - S S D K - P D L N E Y P K P E D - - - - - - - - - - - - - - - - -
 
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