fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042874 not found in 475aa AT2G24260.1 not_1st 0.400715563 II
Pt006766 not found in 448aa AT2G24260.1 not_1st 0.404293381 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G24260.1     ---------MMNSSLLTPSSSSS---------SHIQTPST-------TFD-----HEDFL
pt006766_POPTR_ MRPCSREMQGMN-SLLNPSSQIPLQDLQNQ---QIQNS---------HFDPNSSSNDDFL
gm042874_Glyma1 MQPCSKEMQGLN-SLLNSSSQISLQDLQNHTTNQIQNSHMNHQHQLAHFD--STSHDDFL
                          :* ***..**. .          :**..          **     ::***

AT2G24260.1     DQIFS---SAPWPSVVDDAHP----------------------LPSD-------------
pt006766_POPTR_ EQMLSAIPSCSWAD---PKSP--WDLNPPTNLPFPTNNNSSSAKPRDLFNETPPSNTDNN
gm042874_Glyma1 EQMLS---SCSWTDL-NPNKPLLWDPNTLNDI-----------KPPD---ETTPSNNNND
                :*::*   *..*..      *                       * *             

AT2G24260.1     -------------------GFHGHDVDSRNQP--------IMM-----------------
pt006766_POPTR_ ---NVGFHDNFDESVILASKLRQHQISGGSGA---AAAAKMMLQQQLLMAAARGGLSQ--
gm042874_Glyma1 ATTNVASFSSFDEHSTLASKFRNHQISSNNNAPKNAAAAALMLQHQLLRDS--GLLNMPL
                                    :: *::.. . .        :*:                 

AT2G24260.1     ---------------MPLNDG-SSVHALYNGFSVAGSL-----------PNFQIPQGSGG
pt006766_POPTR_ ---NDDIDV------SPTQGGDGSMQGLFNGFR-AGSMNGTVRASNQSMQHFNHPQGGA-
gm042874_Glyma1 SLPGNDVVVDASTFESPNPSGKASVQTFYNGF--AGSLHGVGQSSNQT-QHFQHPQGSSN
                                *  .* .*:: ::***  ***:            :*: ***.. 

AT2G24260.1     GLMNQQ------GQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERL
pt006766_POPTR_ -MQSPNLGAQGAATTAVMNQPQASG--SNGG---APAQPRQRVRARRGQATDPHSIAERV
gm042874_Glyma1 PMQGQNFGAVPAGGGSATNQAPASGA-AAGG---APAQPRQRVRARRGQATDPHSIAERL
                 : . :      .   . .*. **.  : **   **.*.* ::****************:

AT2G24260.1     RRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI
pt006766_POPTR_ -LERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV
gm042874_Glyma1 RRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLV
                  ****************.***********************************:*:. :

AT2G24260.1     ----SEAGG----SHGN-------ASSAMVGGSQTAG--NSNDSVTMTEHQVAKLMEEDM
pt006766_POPTR_ ADMSSEAGGDCIQANAN---GGSIART--TNGNQTASTNDS--SLTVTEHQVAKLMEEDM
gm042874_Glyma1 ADMSSEGGGDCIQANGKSNGGGAQASTTNTNTNQTTATTTSNDSLTMTEHQVAKLMEEDM
                    **.**    ::.:       * :  .. .**:.   *  *:*:*************

AT2G24260.1     GSAMQYLQGKGLCLMPISLATAISTATCHSR--------NPLIPGAVA----------DV
pt006766_POPTR_ GSAMQYLQGKGLCLMPISLATAISTATCHNRTSGIINSHNPLLQS-------------NG
gm042874_Glyma1 GSAMQYLQGKGLCLMPISLATAISTATCPTRNVNV----NPLINAAAGATHFPTAANPAG
                **************************** .*        ***: .               

AT2G24260.1     GGPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA
pt006766_POPTR_ EGPTSPSMSVLTVQSATM----------GNGV--------AKDAASVSKP
gm042874_Glyma1 EGPSSPSMSVLTVQSAIA----------GN-----------DGAASVSKP
                 **:.*.:* :*:**:            **           . *.****.
BoxShade v3.31 C (beta, 970507) Output
AT2G24260.1     - - - - - - - - - M M N S S L L T P S S S S S - - - - - - - - - S H I Q T P S T - - - - - - - T F D - - - - - H E D F L
pt006766_POPTR_    M R P C S R E M Q G M N - S L L N P S S Q I P L Q D L Q N Q - - - Q I Q N S - - - - - - - - - H F D P N S S S N D D F L
gm042874_Glyma1    M Q P C S K E M Q G L N - S L L N S S S Q I S L Q D L Q N H T T N Q I Q N S H M N H Q H Q L A H F D - - S T S H D D F L
 
AT2G24260.1     D Q I F S - - - S A P W P S V V D D A H P - - - - - - - - - - - - - - - - - - - - - - L P S D - - - - - - - - - - - - -
pt006766_POPTR_    E Q M L S A I P S C S W A D - - - P K S P - - W D L N P P T N L P F P T N N N S S S A K P R D L F N E T P P S N T D N N
gm042874_Glyma1    E Q M L S - - - S C S W T D L - N P N K P L L W D P N T L N D I - - - - - - - - - - - K P P D - - - E T T P S N N N N D
 
AT2G24260.1     - - - - - - - - - - - - - - - - - - - G F H G H D V D S R N Q P - - - - - - - - I M M - - - - - - - - - - - - - - - - -
pt006766_POPTR_    - - - N V G F H D N F D E S V I L A S K L R Q H Q I S G G S G A - - - A A A A K M M L Q Q Q L L M A A A R G G L S Q - -
gm042874_Glyma1    A T T N V A S F S S F D E H S T L A S K F R N H Q I S S N N N A P K N A A A A A L M L Q H Q L L R D S - - G L L N M P L
 
AT2G24260.1     - - - - - - - - - - - - - - - M P L N D G - S S V H A L Y N G F S V A G S L - - - - - - - - - - - P N F Q I P Q G S G G
pt006766_POPTR_    - - - N D D I D V - - - - - - S P T Q G G D G S M Q G L F N G F R - A G S M N G T V R A S N Q S M Q H F N H P Q G G A -
gm042874_Glyma1    S L P G N D V V V D A S T F E S P N P S G K A S V Q T F Y N G F - - A G S L H G V G Q S S N Q T - Q H F Q H P Q G S S N
 
AT2G24260.1     G L M N Q Q - - - - - - G Q T Q T Q T Q P Q A S A S T A T G G T V A A P P Q S R T K I R A R R G Q A T D P H S I A E R L
pt006766_POPTR_    - M Q S P N L G A Q G A A T T A V M N Q P Q A S G - - S N G G - - - A P A Q P R Q R V R A R R G Q A T D P H S I A E R V
gm042874_Glyma1    P M Q G Q N F G A V P A G G G S A T N Q A P A S G A - A A G G - - - A P A Q P R Q R V R A R R G Q A T D P H S I A E R L
 
AT2G24260.1     R R E R I A E R M K A L Q E L V P N G N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S V S S Q I
pt006766_POPTR_    - L E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V
gm042874_Glyma1    R R E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V
 
AT2G24260.1     - - - - S E A G G - - - - S H G N - - - - - - - A S S A M V G G S Q T A G - - N S N D S V T M T E H Q V A K L M E E D M
pt006766_POPTR_    A D M S S E A G G D C I Q A N A N - - - G G S I A R T - - T N G N Q T A S T N D S - - S L T V T E H Q V A K L M E E D M
gm042874_Glyma1    A D M S S E G G G D C I Q A N G K S N G G G A Q A S T T N T N T N Q T T A T T T S N D S L T M T E H Q V A K L M E E D M
 
AT2G24260.1     G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H S R - - - - - - - - N P L I P G A V A - - - - - - - - - - D V
pt006766_POPTR_    G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R T S G I I N S H N P L L Q S - - - - - - - - - - - - - N G
gm042874_Glyma1    G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C P T R N V N V - - - - N P L I N A A A G A T H F P T A A N P A G
 
AT2G24260.1     G G P S P P N L S G M T I Q S T S T K M G S G N G K L N G N G V T E R S S S I A V K E A V S V S K A
pt006766_POPTR_    E G P T S P S M S V L T V Q S A T M - - - - - - - - - - G N G V - - - - - - - - A K D A A S V S K P
gm042874_Glyma1    E G P S S P S M S V L T V Q S A I A - - - - - - - - - - G N - - - - - - - - - - - D G A A S V S K P
 
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